Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   ABZP31_RS00795 Genome accession   NZ_CP160437
Coordinates   171925..173490 (-) Length   521 a.a.
NCBI ID   WP_005405790.1    Uniprot ID   A0A3D3G306
Organism   Acinetobacter sp. FL     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 166925..178490
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZP31_RS00780 (ABZP31_00780) gpmI 167727..169277 (+) 1551 WP_034685834.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -
  ABZP31_RS00785 (ABZP31_00785) - 169297..170484 (+) 1188 WP_034685836.1 S41 family peptidase -
  ABZP31_RS00790 (ABZP31_00790) pilR 170485..171900 (-) 1416 WP_248135015.1 sigma-54 dependent transcriptional regulator Regulator
  ABZP31_RS00795 (ABZP31_00795) pilS 171925..173490 (-) 1566 WP_005405790.1 PAS domain-containing sensor histidine kinase Regulator
  ABZP31_RS00800 (ABZP31_00800) - 173505..174140 (-) 636 WP_005017150.1 response regulator -
  ABZP31_RS00805 (ABZP31_00805) pbpG 174359..175390 (+) 1032 WP_005017149.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  ABZP31_RS00810 (ABZP31_00810) thrC 175478..176623 (-) 1146 WP_005017146.1 threonine synthase -
  ABZP31_RS00815 (ABZP31_00815) - 176681..177985 (-) 1305 WP_005017143.1 homoserine dehydrogenase -

Sequence

Protein


Download         Length: 521 a.a.        Molecular weight: 59269.13 Da        Isoelectric Point: 5.8116

>NTDB_id=1021111 ABZP31_RS00795 WP_005405790.1 171925..173490(-) (pilS) [Acinetobacter sp. FL]
MAPLRPASLLQTIYRLGEWYSAYRLVLALSLNIIFALTLETVAQDYQHPDLYFYSIVGYALISCIQLIFYKILPFEISKQ
LILLFIVDVCCFSLLNFALGGPNLHLSLLFVVTVFAATILLRPQLALIITLVAVISVIYQQVVGSFFNSSHLNSISNSAL
LAFLFFVMYGIGQIAVQRFRLLENLNFYQSIELNQLQNINRAILEQIEVGYLVLDEQQQVILNNPAACSLLGIPPIFTDE
KYFLRKLQPDLYTLIRFSDLKDGERFLFESQLSPFSVDIQVQKLLVPHQALTLLILQDAQKIKQQVQQLKLMALGQLSAS
IAHEIRNPLAAIVQANELLADSQPEQLQMLTGMIDRQSQRIDKIIHDTLNMARNSPTEPAKIRLSGFLAQVLNEDLIDIK
QAVQLQIEQDIWIYFDELQLRQVLINLIRNALRHNSAEQSFIIIRVHGTEERGWIDVIDFGQGVAERDISQLFKPFFSTE
INGTGLGLYLSHSFCEANHAKLTYVKQQQGACFRIECSIIY

Nucleotide


Download         Length: 1566 bp        

>NTDB_id=1021111 ABZP31_RS00795 WP_005405790.1 171925..173490(-) (pilS) [Acinetobacter sp. FL]
ATGGCCCCCCTACGTCCCGCCTCACTGCTTCAGACCATCTACCGTCTGGGAGAGTGGTACAGTGCTTATCGTCTTGTTTT
AGCACTTAGTCTTAATATTATTTTTGCACTAACCCTTGAGACTGTTGCTCAAGACTACCAGCATCCTGACCTGTACTTTT
ATAGTATTGTCGGTTATGCCCTGATCAGCTGTATCCAGCTGATTTTTTATAAAATTCTACCTTTTGAAATTTCGAAGCAG
CTTATTTTACTGTTTATAGTAGATGTATGCTGTTTTAGCCTGCTAAATTTTGCACTGGGTGGACCCAATCTGCACTTAAG
TCTACTTTTTGTAGTGACGGTCTTTGCCGCAACAATTTTACTCAGGCCCCAGCTTGCTTTAATTATCACACTGGTTGCTG
TAATTAGTGTGATTTACCAGCAGGTAGTAGGAAGTTTTTTTAACAGTTCCCATCTCAACAGTATCAGTAATAGTGCTTTA
TTAGCTTTTTTATTTTTTGTGATGTATGGCATTGGACAGATTGCTGTACAGCGGTTTCGCCTTTTGGAAAACCTGAATTT
TTATCAGTCCATTGAGCTTAACCAGCTACAGAATATTAACCGGGCTATTTTGGAGCAAATTGAGGTAGGCTATTTAGTTT
TAGATGAGCAGCAGCAGGTGATTTTAAATAATCCGGCAGCCTGTTCATTACTAGGTATTCCACCGATTTTTACTGATGAA
AAGTATTTTCTACGTAAACTCCAGCCAGACCTGTATACGCTTATCCGGTTTAGTGACTTAAAAGATGGTGAAAGGTTCCT
GTTTGAATCACAGCTTTCACCTTTCAGTGTCGATATACAGGTTCAGAAACTTCTTGTGCCTCATCAAGCTTTAACCCTGT
TGATATTGCAGGATGCCCAGAAAATCAAGCAGCAGGTACAACAATTAAAGCTGATGGCACTGGGACAGCTTTCGGCCAGT
ATTGCCCATGAAATTCGTAATCCTTTGGCAGCTATTGTTCAGGCTAATGAATTATTAGCTGACAGCCAGCCAGAACAGTT
GCAGATGCTCACAGGCATGATTGACCGGCAGTCACAACGTATTGACAAGATTATCCATGATACCTTGAATATGGCACGTA
ACAGTCCGACTGAGCCTGCTAAAATCAGGTTATCAGGTTTTCTTGCCCAAGTTTTAAATGAAGACCTGATCGATATAAAA
CAGGCTGTACAGCTACAGATTGAGCAGGATATCTGGATTTATTTTGATGAGCTCCAGCTACGTCAAGTGCTTATTAATCT
GATCCGTAATGCATTAAGGCATAATTCAGCAGAGCAGTCTTTTATAATTATACGGGTACATGGCACAGAAGAACGCGGCT
GGATTGATGTCATTGATTTTGGTCAAGGCGTAGCAGAGCGCGATATTTCACAATTGTTTAAACCCTTTTTTAGTACCGAA
ATCAATGGAACTGGTTTAGGATTATATTTATCTCACAGTTTTTGTGAGGCTAATCATGCAAAACTTACTTATGTCAAGCA
ACAACAAGGCGCATGTTTTCGAATCGAATGCTCCATTATTTATTAG

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(313-374)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(416-515)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3D3G306

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

62.984

99.04

0.624

Multiple sequence alignment