Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ABZ559_RS11300 Genome accession   NZ_CP160400
Coordinates   2277158..2277883 (-) Length   241 a.a.
NCBI ID   WP_367006477.1    Uniprot ID   -
Organism   Streptococcus sp. ZY19097     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2272158..2282883
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZ559_RS11270 (ABZ559_11270) - 2272706..2273239 (+) 534 WP_367006474.1 hypothetical protein -
  ABZ559_RS11275 (ABZ559_11275) - 2273365..2274432 (+) 1068 WP_367006475.1 tyrosine-type recombinase/integrase -
  ABZ559_RS11285 (ABZ559_11285) trmB 2274637..2275272 (-) 636 WP_277291416.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ABZ559_RS11290 (ABZ559_11290) ccrZ 2275272..2276063 (-) 792 WP_018375776.1 cell cycle regulator CcrZ -
  ABZ559_RS11295 (ABZ559_11295) - 2276122..2277156 (-) 1035 WP_273404745.1 ABC transporter permease -
  ABZ559_RS11300 (ABZ559_11300) pptA 2277158..2277883 (-) 726 WP_367006477.1 ABC transporter ATP-binding protein Regulator
  ABZ559_RS11305 (ABZ559_11305) - 2277948..2278367 (+) 420 WP_273404748.1 HIT family protein -
  ABZ559_RS11310 (ABZ559_11310) - 2278364..2278657 (+) 294 WP_018375780.1 hypothetical protein -
  ABZ559_RS11315 (ABZ559_11315) - 2278797..2278895 (-) 99 Protein_2225 IS200/IS605 family transposase -
  ABZ559_RS11320 (ABZ559_11320) - 2279112..2280242 (-) 1131 WP_273414356.1 LCP family protein -
  ABZ559_RS11325 (ABZ559_11325) - 2280252..2280773 (-) 522 WP_273414357.1 GNAT family N-acetyltransferase -
  ABZ559_RS11330 (ABZ559_11330) tsaE 2280766..2281209 (-) 444 WP_273414358.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ABZ559_RS11335 (ABZ559_11335) - 2281316..2282737 (-) 1422 WP_317335506.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26691.00 Da        Isoelectric Point: 4.4668

>NTDB_id=1020952 ABZ559_RS11300 WP_367006477.1 2277158..2277883(-) (pptA) [Streptococcus sp. ZY19097]
MLKIENVTGGYVNIPVLKNISFEVADGELVGLIGLNGAGKSTTINEIIGLLQPYQGQISIDGLSLSQNQADYRKKIGFIP
ETPSLYEELTLREHIETVAMAYDIPVDEALVRAEKLLQIFRLSDKLEWFPINFSKGMKQKVMIICAFIVDPSLFIIDEPF
LGLDPLAIADLTDLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHQGQVRAVGTLEELQKTFADSTASLNDIYMALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1020952 ABZ559_RS11300 WP_367006477.1 2277158..2277883(-) (pptA) [Streptococcus sp. ZY19097]
ATGTTAAAAATTGAAAATGTAACAGGTGGTTATGTTAATATCCCTGTTTTAAAAAATATTTCCTTTGAGGTGGCTGATGG
AGAATTGGTCGGTTTGATTGGGCTTAATGGTGCTGGAAAATCAACGACTATCAATGAAATCATTGGTCTATTGCAGCCTT
ATCAAGGTCAGATTAGCATAGATGGGCTGAGCCTTTCTCAAAATCAGGCTGACTATCGCAAAAAGATAGGTTTCATTCCT
GAGACACCAAGTCTTTATGAAGAATTAACTCTGCGTGAGCATATCGAAACAGTGGCGATGGCCTATGATATTCCTGTAGA
TGAGGCCTTAGTGCGTGCTGAAAAGTTATTACAAATCTTCCGTCTATCCGATAAGTTGGAGTGGTTTCCTATCAATTTCT
CTAAGGGAATGAAGCAGAAGGTTATGATTATTTGTGCCTTTATTGTTGATCCTAGTTTATTTATCATTGATGAGCCTTTT
CTCGGCTTGGATCCTTTGGCGATTGCAGATTTGACAGATTTATTAGCTGAGGAGAAGGCTAAAGGCAAGTCAATCTTGAT
GTCAACCCATGTTTTGGATTCTGCAGAGAAAATGTGTGATCGTTTTGTGATTTTACATCAAGGTCAGGTGCGGGCAGTTG
GGACTTTGGAAGAATTACAGAAAACATTTGCTGACAGCACGGCTAGTCTCAACGATATCTATATGGCTTTGACGAAAGAG
GTTTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

79.498

99.17

0.788
  pptA Streptococcus thermophilus LMD-9

78.243

99.17

0.776

Multiple sequence alignment