Detailed information NTG1020754

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ABUE11_RS03820
• Genome accession: NZ_CP160388
• Coordinates: 814085..815239 (-)
• Length: 384 a.a.
• NCBI ID: WP_367067758.1
• Uniprot ID: -
• Organism: Oryzisolibacter sp. LB2S
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 809085..820239

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABUE11_RS03795	cyoE	809878..810768 (+)	891	WP_367068738.1	heme o synthase	-
ABUE11_RS03800	-	810816..811379 (+)	564	WP_367067754.1	SCO family protein	-
ABUE11_RS03805	-	811564..812574 (-)	1011	WP_367067755.1	tripartite tricarboxylate transporter substrate binding protein	-
ABUE11_RS03810	rpoH	812685..813620 (-)	936	WP_367067756.1	RNA polymerase sigma factor RpoH	-
ABUE11_RS03815	cutA	813734..814060 (+)	327	WP_367067757.1	divalent-cation tolerance protein CutA	-
ABUE11_RS03820	pilA	814085..815239 (-)	1155	WP_367067758.1	signal recognition particle-docking protein FtsY	Machinery gene
ABUE11_RS03825	-	815269..816702 (+)	1434	WP_367067759.1	pitrilysin family protein	-
ABUE11_RS03830	-	816851..818221 (+)	1371	WP_367067760.1	pitrilysin family protein	-
ABUE11_RS03835	rsmD	818218..818835 (+)	618	WP_367067761.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ABUE11_RS03840	coaD	818962..819450 (+)	489	WP_367067762.1	pantetheine-phosphate adenylyltransferase	-
ABUE11_RS03845	-	819477..819791 (-)	315	WP_367067763.1	BON domain-containing protein	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 40176.87 Da
• Isoelectric Point: 6.2640

>NTDB_id=1020754 ABUE11_RS03820 WP_367067758.1 814085..815239(-) (pilA) [Oryzisolibacter sp. LB2S]
MFSFFKKKSPSPAAPTETPAPDAAPATPVSAPQADTPATDTPKSGGALGWLRKSLGGQDAPAAQAPATPDAAPPAVPEPA
PKPEGARQGWMERLKSGLRKTGSSIATVFTGTQINDALYEELEDALLMADTGVKATQHLLTDLKRRVKETKTTEPAAVKA
LLADALADLLRPLEKPLVIGEHSPTVIMVAGVNGAGKTTSIGKLTKHLADHGESVLLAAADTFRAAAREQLGVWATRNTV
EIISQEGGDPAAVSFDAVTAGRARGKDVVLVDTAGRLPTQLHLMEELKKIRRVVTKAEASAPHEVLLVIDGNTGQNALTQ
VRAFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPVPVYFIGVGEKVEDLETFNAREFAQALLA

Nucleotide

• Length: 1155 bp

>NTDB_id=1020754 ABUE11_RS03820 WP_367067758.1 814085..815239(-) (pilA) [Oryzisolibacter sp. LB2S]
ATGTTCAGTTTCTTCAAGAAAAAATCCCCCTCGCCCGCCGCGCCCACCGAGACGCCGGCGCCCGATGCCGCACCCGCCAC
CCCTGTCTCCGCCCCACAGGCCGACACGCCTGCGACCGACACGCCCAAGAGCGGCGGCGCCCTCGGCTGGTTGCGCAAGT
CCCTGGGTGGCCAGGATGCACCCGCAGCCCAGGCTCCAGCCACACCGGACGCGGCCCCGCCCGCCGTGCCCGAGCCTGCC
CCAAAACCCGAGGGCGCGCGCCAGGGCTGGATGGAGCGCCTGAAGTCCGGCCTGCGCAAGACCGGCAGCTCCATTGCCAC
GGTGTTCACGGGCACGCAGATCAACGACGCGCTCTACGAGGAGCTCGAGGACGCGCTGCTCATGGCCGACACGGGCGTCA
AGGCCACGCAGCATCTGCTCACCGACCTCAAGCGCCGCGTGAAGGAGACCAAGACCACCGAGCCCGCCGCCGTCAAGGCG
CTGCTGGCCGACGCCCTGGCCGACCTGCTGCGCCCGCTGGAAAAGCCGCTGGTCATAGGCGAGCACAGCCCCACCGTGAT
CATGGTGGCCGGCGTGAACGGCGCGGGCAAGACCACGTCGATTGGCAAGCTCACCAAGCATCTGGCCGACCATGGCGAGA
GCGTGCTGCTGGCCGCGGCCGACACCTTCCGCGCCGCGGCGCGCGAGCAGCTCGGCGTCTGGGCCACGCGCAACACCGTG
GAGATCATCAGCCAGGAAGGCGGCGACCCCGCCGCCGTGAGCTTTGACGCCGTCACCGCCGGGCGCGCGCGCGGCAAGGA
CGTGGTGCTGGTGGACACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAGGAGCTGAAAAAAATCCGCCGCGTGG
TCACCAAGGCCGAGGCCAGCGCCCCGCACGAGGTACTGCTGGTGATCGACGGCAACACCGGCCAGAACGCCCTGACCCAG
GTGCGCGCCTTCGACGATGCGCTGCAGCTCACGGGCCTGATCGTCACCAAATTGGACGGCACGGCCAAGGGCGGCGTGCT
CGCGGCCATCGCCCAGGAGCGGCCCGTGCCGGTCTACTTCATCGGCGTGGGCGAGAAGGTCGAAGACCTCGAAACCTTCA
ACGCGCGCGAATTCGCCCAGGCGCTGCTGGCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (103-166)

• SRP54-type protein, GTPase domain (SRP54) (184-383)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.24	100	0.544