Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   AB1F71_RS09680 Genome accession   NZ_CP160386
Coordinates   1953100..1953534 (+) Length   144 a.a.
NCBI ID   WP_002262387.1    Uniprot ID   -
Organism   Streptococcus mutans strain UA159 ykuR deletion     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1948100..1958534
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1F71_RS09655 (AB1F71_09655) - 1950062..1951633 (-) 1572 WP_011074689.1 membrane protein -
  AB1F71_RS09660 (AB1F71_09660) - 1951670..1951798 (-) 129 WP_002262383.1 hypothetical protein -
  AB1F71_RS09665 (AB1F71_09665) - 1951867..1952166 (-) 300 WP_002262384.1 DUF1292 domain-containing protein -
  AB1F71_RS09670 (AB1F71_09670) ruvX 1952247..1952666 (-) 420 WP_002262385.1 Holliday junction resolvase RuvX -
  AB1F71_RS09675 (AB1F71_09675) - 1952663..1952932 (-) 270 WP_002262386.1 IreB family regulatory phosphoprotein -
  AB1F71_RS09680 (AB1F71_09680) brsR 1953100..1953534 (+) 435 WP_002262387.1 bacteriocin genes transcriptional regulator BrsR Regulator
  AB1F71_RS09685 (AB1F71_09685) brsM 1953547..1953993 (+) 447 WP_002262388.1 bacteriocin genes regulator BrsM Regulator
  AB1F71_RS09690 (AB1F71_09690) - 1953984..1954196 (-) 213 WP_002262389.1 hypothetical protein -
  AB1F71_RS09695 (AB1F71_09695) - 1954323..1954748 (-) 426 WP_002262390.1 hypothetical protein -
  AB1F71_RS09700 (AB1F71_09700) spx 1954999..1955397 (-) 399 WP_002262391.1 transcriptional regulator Spx -
  AB1F71_RS09705 (AB1F71_09705) recA 1955482..1956633 (-) 1152 WP_002262392.1 recombinase RecA Machinery gene
  AB1F71_RS09710 (AB1F71_09710) cinA 1956673..1957929 (-) 1257 WP_002262393.1 competence/damage-inducible protein A Machinery gene

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 17187.24 Da        Isoelectric Point: 10.5565

>NTDB_id=1020717 AB1F71_RS09680 WP_002262387.1 1953100..1953534(+) (brsR) [Streptococcus mutans strain UA159 ykuR deletion]
MKVKIIKDSNFKEPLLQIYTRHIDKQTQRVIDFIQQRPNIVYGYKNKCLEFIPLEKVIRIFTENKQVLIQTLTDTYLAKQ
RLYFFEQELGTPFIRISQGEIINIKYIKQLNLTIRGSIEVTFKNGTVSFVARRSLKRFKEQLNL

Nucleotide


Download         Length: 435 bp        

>NTDB_id=1020717 AB1F71_RS09680 WP_002262387.1 1953100..1953534(+) (brsR) [Streptococcus mutans strain UA159 ykuR deletion]
ATGAAAGTAAAAATTATCAAGGATTCAAACTTTAAGGAACCCTTACTCCAAATCTATACACGTCATATTGATAAACAAAC
GCAAAGAGTGATTGATTTTATTCAACAAAGACCTAATATCGTTTATGGTTACAAAAATAAATGCTTAGAGTTTATCCCAC
TAGAAAAAGTGATTCGTATTTTCACGGAAAACAAACAGGTCTTAATTCAAACACTAACCGATACCTATTTAGCTAAACAA
AGACTCTACTTTTTTGAGCAAGAATTAGGAACACCTTTTATTCGTATCTCCCAAGGTGAAATCATCAATATCAAATATAT
TAAACAATTGAATTTAACCATCCGAGGCAGCATTGAAGTGACTTTCAAAAATGGAACAGTCAGTTTCGTGGCTAGGCGAA
GTTTGAAACGCTTCAAAGAACAATTAAATCTTTAA

Domains

Predicted by InterproScan.

LytTr DNA-binding domain (LytTR)

(50-142)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

100

100

1

Multiple sequence alignment