Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG/cglG   Type   Machinery gene
Locus tag   DQM55_RS10750 Genome accession   NZ_LS483364
Coordinates   2160310..2160702 (-) Length   130 a.a.
NCBI ID   WP_002907445.1    Uniprot ID   -
Organism   Streptococcus sanguinis strain NCTC11086     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2155310..2165702
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM55_RS10730 (NCTC11086_02173) - 2156385..2157023 (-) 639 WP_111676733.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  DQM55_RS10735 (NCTC11086_02174) - 2157141..2157890 (-) 750 WP_172454770.1 CPBP family intramembrane glutamic endopeptidase -
  DQM55_RS10740 (NCTC11086_02175) - 2158033..2159226 (-) 1194 WP_111676737.1 acetate kinase -
  DQM55_RS10745 (NCTC11086_02176) comGH 2159263..2160228 (-) 966 WP_111676739.1 class I SAM-dependent methyltransferase Machinery gene
  DQM55_RS10750 (NCTC11086_02177) comGG/cglG 2160310..2160702 (-) 393 WP_002907445.1 competence type IV pilus minor pilin ComGG Machinery gene
  DQM55_RS10755 (NCTC11086_02178) comGF/cglF 2160683..2161120 (-) 438 WP_111676741.1 competence type IV pilus minor pilin ComGF Machinery gene
  DQM55_RS10760 (NCTC11086_02179) comGE/cglE 2161104..2161397 (-) 294 WP_111676743.1 competence type IV pilus minor pilin ComGE Machinery gene
  DQM55_RS10765 (NCTC11086_02180) comGD 2161363..2161797 (-) 435 WP_172454771.1 competence type IV pilus minor pilin ComGD Machinery gene
  DQM55_RS10770 (NCTC11086_02181) comGC 2161757..2162074 (-) 318 WP_002896769.1 competence type IV pilus major pilin ComGC Machinery gene
  DQM55_RS10775 (NCTC11086_02182) comGB 2162074..2163108 (-) 1035 WP_269459928.1 competence type IV pilus assembly protein ComGB Machinery gene
  DQM55_RS10780 (NCTC11086_02183) comGA 2163038..2163979 (-) 942 WP_111676749.1 competence type IV pilus ATPase ComGA Machinery gene
  DQM55_RS10785 (NCTC11086_02184) - 2164109..2164489 (-) 381 WP_002903497.1 DUF1033 family protein -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14709.87 Da        Isoelectric Point: 9.8905

>NTDB_id=1020719 DQM55_RS10750 WP_002907445.1 2160310..2160702(-) (comGG/cglG) [Streptococcus sanguinis strain NCTC11086]
MWKKKVEAGILLYALLMAAVFSLLLQFYLNRQVSSQRLQLFNRERTEAYAMAVLTKATAKDDSGEMEFEQGKAVYRKKGK
ELEIGSQLSSGHSYSFTFTISKKEEEKAKEDKKPTDKKEKAISDEAGKSG

Nucleotide


Download         Length: 393 bp        

>NTDB_id=1020719 DQM55_RS10750 WP_002907445.1 2160310..2160702(-) (comGG/cglG) [Streptococcus sanguinis strain NCTC11086]
GTGTGGAAGAAGAAAGTTGAGGCAGGTATTTTACTGTATGCGCTGCTGATGGCCGCAGTCTTTAGCCTGCTCCTGCAGTT
TTATCTCAACCGTCAAGTCAGCAGTCAGCGTTTGCAGCTTTTCAACAGGGAAAGGACAGAAGCCTATGCAATGGCAGTTC
TGACAAAAGCTACAGCCAAGGATGATAGCGGTGAGATGGAGTTTGAGCAGGGCAAGGCGGTCTACCGTAAGAAAGGGAAG
GAACTGGAAATCGGCAGTCAGCTCAGCAGCGGGCATTCCTATTCCTTTACTTTTACCATTTCTAAGAAGGAGGAGGAGAA
AGCTAAGGAAGACAAGAAACCAACTGACAAAAAAGAGAAAGCAATTTCGGACGAAGCTGGTAAGTCGGGCTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG/cglG Streptococcus mitis NCTC 12261

47.475

76.154

0.362
  comGG Streptococcus mutans UA140

43.119

83.846

0.362
  comGG Streptococcus mutans UA159

43.119

83.846

0.362

Multiple sequence alignment