Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   AB0R67_RS06075 Genome accession   NZ_CP160237
Coordinates   1179906..1180589 (+) Length   227 a.a.
NCBI ID   WP_000350715.1    Uniprot ID   A0AAN4HLX4
Organism   Bacillus thuringiensis strain JJ1216     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1174906..1185589
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R67_RS06055 (AB0R67_06060) - 1175970..1177616 (+) 1647 WP_071731611.1 peptide ABC transporter substrate-binding protein -
  AB0R67_RS06060 (AB0R67_06065) - 1177644..1177847 (-) 204 WP_000559974.1 hypothetical protein -
  AB0R67_RS06065 (AB0R67_06070) spx 1178441..1178836 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  AB0R67_RS06070 (AB0R67_06075) - 1178886..1179560 (-) 675 WP_000362604.1 TerC family protein -
  AB0R67_RS06075 (AB0R67_06080) mecA 1179906..1180589 (+) 684 WP_000350715.1 adaptor protein MecA Regulator
  AB0R67_RS06080 (AB0R67_06085) - 1180662..1182206 (+) 1545 WP_000799191.1 cardiolipin synthase -
  AB0R67_RS06085 (AB0R67_06090) - 1182287..1183531 (+) 1245 WP_098674627.1 competence protein CoiA family protein -
  AB0R67_RS06090 (AB0R67_06095) pepF 1183582..1185414 (+) 1833 WP_335446216.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26996.03 Da        Isoelectric Point: 3.9822

>NTDB_id=1020373 AB0R67_RS06075 WP_000350715.1 1179906..1180589(+) (mecA) [Bacillus thuringiensis strain JJ1216]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=1020373 AB0R67_RS06075 WP_000350715.1 1179906..1180589(+) (mecA) [Bacillus thuringiensis strain JJ1216]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGACGGACAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAACAAGAGTTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAATTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTGTTTTAGAATATGGGGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.702

100

0.559


Multiple sequence alignment