Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AB0R86_RS02320 Genome accession   NZ_CP160227
Coordinates   456085..457038 (-) Length   317 a.a.
NCBI ID   WP_015239156.1    Uniprot ID   A0AAP3YGS2
Organism   Bacillus velezensis strain JJ947     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 451085..462038
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R86_RS02300 (AB0R86_02300) - 451964..453388 (+) 1425 WP_335394963.1 MDR family MFS transporter -
  AB0R86_RS02305 (AB0R86_02305) - 453430..454374 (-) 945 WP_007410275.1 siderophore ABC transporter substrate-binding protein -
  AB0R86_RS02310 (AB0R86_02310) - 454396..455154 (-) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  AB0R86_RS02315 (AB0R86_02315) - 455148..456095 (-) 948 WP_335394966.1 iron chelate uptake ABC transporter family permease subunit -
  AB0R86_RS02320 (AB0R86_02320) ceuB 456085..457038 (-) 954 WP_015239156.1 ABC transporter permease Machinery gene
  AB0R86_RS02325 (AB0R86_02325) - 457452..458816 (+) 1365 WP_042634827.1 aspartate kinase -
  AB0R86_RS02330 (AB0R86_02330) - 458911..459006 (+) 96 WP_021495118.1 YjcZ family sporulation protein -
  AB0R86_RS02335 (AB0R86_02335) phrC 459154..459273 (-) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  AB0R86_RS02340 (AB0R86_02340) rapC 459257..460405 (-) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  AB0R86_RS02345 (AB0R86_02345) - 460558..461991 (-) 1434 WP_335394969.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=1020093 AB0R86_RS02320 WP_015239156.1 456085..457038(-) (ceuB) [Bacillus velezensis strain JJ947]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=1020093 AB0R86_RS02320 WP_015239156.1 456085..457038(-) (ceuB) [Bacillus velezensis strain JJ947]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGGAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAATATTGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGATCTGATC
CAAAACCTGTCATCATGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGAGTGATTATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536

Multiple sequence alignment