Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   AB0R77_RS05085 Genome accession   NZ_CP160226
Coordinates   1010231..1011181 (+) Length   316 a.a.
NCBI ID   WP_366559346.1    Uniprot ID   -
Organism   Bacillus safensis strain JJ1244     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1005231..1016181
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R77_RS05060 (AB0R77_05060) - 1006709..1007569 (+) 861 WP_034282185.1 SDR family oxidoreductase -
  AB0R77_RS05065 (AB0R77_05065) - 1007626..1007862 (-) 237 WP_008348804.1 IDEAL domain-containing protein -
  AB0R77_RS05070 (AB0R77_05070) comK 1008152..1008730 (+) 579 WP_041117040.1 competence protein ComK Regulator
  AB0R77_RS05075 (AB0R77_05075) - 1009029..1009511 (+) 483 WP_041117042.1 hypothetical protein -
  AB0R77_RS05080 (AB0R77_05080) - 1009794..1010069 (+) 276 WP_041117044.1 barstar family protein -
  AB0R77_RS05085 (AB0R77_05085) ceuB 1010231..1011181 (+) 951 WP_366559346.1 ABC transporter permease Machinery gene
  AB0R77_RS05090 (AB0R77_05090) - 1011174..1012124 (+) 951 WP_046310457.1 iron chelate uptake ABC transporter family permease subunit -
  AB0R77_RS05095 (AB0R77_05095) - 1012115..1012873 (+) 759 WP_041117050.1 ATP-binding cassette domain-containing protein -
  AB0R77_RS05100 (AB0R77_05100) - 1012896..1013840 (+) 945 WP_046310460.1 siderophore ABC transporter substrate-binding protein -
  AB0R77_RS05105 (AB0R77_05105) - 1013979..1014932 (+) 954 WP_034282168.1 LCP family protein -
  AB0R77_RS05110 (AB0R77_05110) - 1015001..1015363 (-) 363 WP_034282166.1 hypothetical protein -
  AB0R77_RS05115 (AB0R77_05115) - 1015520..1016137 (+) 618 WP_024425492.1 TVP38/TMEM64 family protein -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 34904.25 Da        Isoelectric Point: 9.7476

>NTDB_id=1020034 AB0R77_RS05085 WP_366559346.1 1010231..1011181(+) (ceuB) [Bacillus safensis strain JJ1244]
MKLYQLSLLFVCLACISLFVGVQDLSILELFHLTNEQVHTLVSSRLPRLVSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILAAMLVFTHANPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1020034 AB0R77_RS05085 WP_366559346.1 1010231..1011181(+) (ceuB) [Bacillus safensis strain JJ1244]
ATGAAGTTGTATCAATTAAGTTTGTTATTTGTATGTTTGGCATGTATATCTCTGTTTGTCGGTGTACAGGATCTGTCCAT
TTTAGAACTGTTTCATTTAACAAATGAACAAGTGCACACGTTAGTTTCAAGCCGCCTCCCGCGTCTCGTGAGTATTGTGC
TTGCTGGTATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGCAGCAATGCTTGTTTTTACACATGCGAATCCGCTTATGAAAATGGG
GATTGCGTTTCTATTTACTTTAGCTGGAAATCTTCTTTTCTTAAAAATCCTGCGGCATATCAAGGTGAACGATACGATTT
ATGTACCATTAGTCGGCTTAATGTTTGGGGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTTCAAGGGGATTTTTCTCTTATTGTCCAAGGGCGTTATGAACTGCTCTATGTGAGCGTTCC
ACTATTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGCATGGGCGAGAGCTTTGCTGTCAACTTAGGTT
TAACGTATAAACGTGTGATGGCAGTTGGTTTGGTGATCGTTTCAATGATTACGTCTGTCACCATTTTAACTGTCGGGATG
CTGCCATTCCTTGGATTAATCATTCCGAATATTGTTTCGATCTATCGCGGCGATCACTTGAAAAAAAGCCTCCCTCATAC
AGCTTTACTAGGAGCTATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCAGTTG
GGCTCATGGTAGGCATCATCGGGAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAACGCTATGCATAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.495

95.253

0.491


Multiple sequence alignment