Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | AB0R77_RS05070 | Genome accession | NZ_CP160226 |
| Coordinates | 1008152..1008730 (+) | Length | 192 a.a. |
| NCBI ID | WP_041117040.1 | Uniprot ID | - |
| Organism | Bacillus safensis strain JJ1244 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1003152..1013730
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB0R77_RS05050 (AB0R77_05050) | - | 1003646..1004941 (-) | 1296 | WP_024426546.1 | globin-coupled sensor protein | - |
| AB0R77_RS05055 (AB0R77_05055) | - | 1005035..1006567 (-) | 1533 | WP_041117038.1 | FAD-dependent oxidoreductase | - |
| AB0R77_RS05060 (AB0R77_05060) | - | 1006709..1007569 (+) | 861 | WP_034282185.1 | SDR family oxidoreductase | - |
| AB0R77_RS05065 (AB0R77_05065) | - | 1007626..1007862 (-) | 237 | WP_008348804.1 | IDEAL domain-containing protein | - |
| AB0R77_RS05070 (AB0R77_05070) | comK | 1008152..1008730 (+) | 579 | WP_041117040.1 | competence protein ComK | Regulator |
| AB0R77_RS05075 (AB0R77_05075) | - | 1009029..1009511 (+) | 483 | WP_041117042.1 | hypothetical protein | - |
| AB0R77_RS05080 (AB0R77_05080) | - | 1009794..1010069 (+) | 276 | WP_041117044.1 | barstar family protein | - |
| AB0R77_RS05085 (AB0R77_05085) | ceuB | 1010231..1011181 (+) | 951 | WP_366559346.1 | ABC transporter permease | Machinery gene |
| AB0R77_RS05090 (AB0R77_05090) | - | 1011174..1012124 (+) | 951 | WP_046310457.1 | iron chelate uptake ABC transporter family permease subunit | - |
| AB0R77_RS05095 (AB0R77_05095) | - | 1012115..1012873 (+) | 759 | WP_041117050.1 | ATP-binding cassette domain-containing protein | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22292.33 Da Isoelectric Point: 8.7962
>NTDB_id=1020033 AB0R77_RS05070 WP_041117040.1 1008152..1008730(+) (comK) [Bacillus safensis strain JJ1244]
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVTFTNEQAVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNKY
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVTFTNEQAVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNKY
Nucleotide
Download Length: 579 bp
>NTDB_id=1020033 AB0R77_RS05070 WP_041117040.1 1008152..1008730(+) (comK) [Bacillus safensis strain JJ1244]
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCAGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTTATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCCCTGCAAATTATTGAACGCA
GCTGCAGATTCTTCGGCTCAAGCTATGCAGGCAGAAAGGCGGGAACATACGAAGTAACAGGAATTTCTCACAAACCCCCA
ATTGTGATTGACTCATCCAATCATCTGTATTTTTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAAGAATCATCCCTCGGAGACACGGTGGTCACCTTTACAAACGAGCAAGCCGTCAAACTTG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACCGGACAGCATATCTCCGAACGAAATTTCAAGATCGTCTCGATGGA
GGTCTTCCGAAGAAACAAGAATTTATGCTGTATCCAAAAGAACAGCAGCTCAATCTCGTATACGATTTTATATTAAGGGA
GCTTCGAAACAAATATTAG
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCAGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTTATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCCCTGCAAATTATTGAACGCA
GCTGCAGATTCTTCGGCTCAAGCTATGCAGGCAGAAAGGCGGGAACATACGAAGTAACAGGAATTTCTCACAAACCCCCA
ATTGTGATTGACTCATCCAATCATCTGTATTTTTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAAGAATCATCCCTCGGAGACACGGTGGTCACCTTTACAAACGAGCAAGCCGTCAAACTTG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACCGGACAGCATATCTCCGAACGAAATTTCAAGATCGTCTCGATGGA
GGTCTTCCGAAGAAACAAGAATTTATGCTGTATCCAAAAGAACAGCAGCTCAATCTCGTATACGATTTTATATTAAGGGA
GCTTCGAAACAAATATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
60.938 |
100 |
0.609 |