Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   DQL37_RS07470 Genome accession   NZ_LS483352
Coordinates   1419521..1420555 (-) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain NCTC12052     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1414521..1425555
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL37_RS07435 (NCTC12052_01477) - 1415297..1415599 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  DQL37_RS07440 (NCTC12052_01478) rnpM 1415592..1415888 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  DQL37_RS07445 (NCTC12052_01479) nusA 1415904..1417061 (-) 1158 WP_002994325.1 transcription termination factor NusA -
  DQL37_RS07450 (NCTC12052_01480) rimP 1417236..1417772 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  DQL37_RS07460 (NCTC12052_01482) trmB 1418031..1418666 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQL37_RS07465 (NCTC12052_01483) ccrZ 1418666..1419457 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQL37_RS07470 (NCTC12052_01484) pptB 1419521..1420555 (-) 1035 WP_010922583.1 ABC transporter permease Regulator
  DQL37_RS07475 (NCTC12052_01485) pptA 1420558..1421283 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DQL37_RS07480 (NCTC12052_01486) - 1421355..1421774 (+) 420 WP_002983376.1 HIT family protein -
  DQL37_RS07485 (NCTC12052_01487) - 1421771..1422127 (+) 357 WP_002988657.1 hypothetical protein -
  DQL37_RS07490 (NCTC12052_01488) brpA 1422238..1423512 (-) 1275 WP_020837594.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQL37_RS07495 (NCTC12052_01489) - 1423521..1424045 (-) 525 WP_009880752.1 GNAT family N-acetyltransferase -
  DQL37_RS07500 (NCTC12052_01490) tsaE 1424020..1424481 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=1019712 DQL37_RS07470 WP_010922583.1 1419521..1420555(-) (pptB) [Streptococcus pyogenes strain NCTC12052]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=1019712 DQL37_RS07470 WP_010922583.1 1419521..1420555(-) (pptB) [Streptococcus pyogenes strain NCTC12052]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTCAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427

Multiple sequence alignment