Detailed information NTG1019513

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AB0R89_RS01985
• Genome accession: NZ_CP160218
• Coordinates: 391094..392242 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain AP45
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 386094..397242

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R89_RS01965 (AB0R89_01965)	-	386491..387174 (-)	684	WP_012116795.1	ABC transporter ATP-binding protein	-
AB0R89_RS01970 (AB0R89_01970)	-	387189..388625 (-)	1437	WP_043021398.1	ABC transporter permease	-
AB0R89_RS01975 (AB0R89_01975)	-	388838..389521 (+)	684	WP_007410267.1	response regulator transcription factor	-
AB0R89_RS01980 (AB0R89_01980)	-	389508..390935 (+)	1428	WP_162533087.1	HAMP domain-containing sensor histidine kinase	-
AB0R89_RS01985 (AB0R89_01985)	rapC	391094..392242 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
AB0R89_RS01990 (AB0R89_01990)	phrC	392226..392345 (+)	120	WP_033575081.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
AB0R89_RS01995 (AB0R89_01995)	-	392493..392588 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
AB0R89_RS02000 (AB0R89_02000)	-	392683..394047 (-)	1365	WP_043021400.1	aspartate kinase	-
AB0R89_RS02005 (AB0R89_02005)	ceuB	394461..395414 (+)	954	WP_012116802.1	ABC transporter permease	Machinery gene
AB0R89_RS02010 (AB0R89_02010)	-	395404..396351 (+)	948	WP_012116803.1	iron chelate uptake ABC transporter family permease subunit	-
AB0R89_RS02015 (AB0R89_02015)	-	396345..397103 (+)	759	WP_043021401.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=1019513 AB0R89_RS01985 WP_007410270.1 391094..392242(+) (rapC) [Bacillus velezensis strain AP45]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1019513 AB0R89_RS01985 WP_007410270.1 391094..392242(+) (rapC) [Bacillus velezensis strain AP45]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGATTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568