Detailed information NTG1019437

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AB0R90_RS02065
• Genome accession: NZ_CP160217
• Coordinates: 409251..410399 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain AP52
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 404251..415399

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R90_RS02045 (AB0R90_02045)	-	404648..405331 (-)	684	WP_099566393.1	ABC transporter ATP-binding protein	-
AB0R90_RS02050 (AB0R90_02050)	-	405346..406782 (-)	1437	WP_099566394.1	ABC transporter permease	-
AB0R90_RS02055 (AB0R90_02055)	-	406995..407678 (+)	684	WP_007410267.1	response regulator transcription factor	-
AB0R90_RS02060 (AB0R90_02060)	-	407665..409098 (+)	1434	WP_162992601.1	HAMP domain-containing sensor histidine kinase	-
AB0R90_RS02065 (AB0R90_02065)	rapC	409251..410399 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
AB0R90_RS02070 (AB0R90_02070)	phrC	410383..410502 (+)	120	WP_033575081.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
AB0R90_RS02075 (AB0R90_02075)	-	410651..410746 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
AB0R90_RS02080 (AB0R90_02080)	-	410841..412205 (-)	1365	WP_020955323.1	aspartate kinase	-
AB0R90_RS02085 (AB0R90_02085)	ceuB	412619..413572 (+)	954	WP_059366593.1	ABC transporter permease	Machinery gene
AB0R90_RS02090 (AB0R90_02090)	-	413562..414509 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
AB0R90_RS02095 (AB0R90_02095)	-	414503..415261 (+)	759	WP_012116804.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=1019437 AB0R90_RS02065 WP_007410270.1 409251..410399(+) (rapC) [Bacillus velezensis strain AP52]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1019437 AB0R90_RS02065 WP_007410270.1 409251..410399(+) (rapC) [Bacillus velezensis strain AP52]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGATTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568