Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   AB0R74_RS14735 Genome accession   NZ_CP160216
Coordinates   2997928..2998572 (-) Length   214 a.a.
NCBI ID   WP_003152052.1    Uniprot ID   A3KLB8
Organism   Bacillus velezensis strain JJ1043     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2992928..3003572
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R74_RS14700 (AB0R74_14700) - 2994113..2994544 (+) 432 WP_366561050.1 Na(+)/H(+) antiporter subunit B -
  AB0R74_RS14705 (AB0R74_14705) - 2994544..2994885 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  AB0R74_RS14710 (AB0R74_14710) - 2994878..2996359 (+) 1482 WP_216061840.1 Na+/H+ antiporter subunit D -
  AB0R74_RS14715 (AB0R74_14715) - 2996365..2996841 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  AB0R74_RS14720 (AB0R74_14720) - 2996841..2997125 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  AB0R74_RS14725 (AB0R74_14725) mnhG 2997109..2997483 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  AB0R74_RS14730 (AB0R74_14730) - 2997523..2997906 (-) 384 WP_007408674.1 hotdog fold thioesterase -
  AB0R74_RS14735 (AB0R74_14735) comA 2997928..2998572 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  AB0R74_RS14740 (AB0R74_14740) comP 2998653..3000953 (-) 2301 WP_032867184.1 histidine kinase Regulator
  AB0R74_RS14745 (AB0R74_14745) comX 3000967..3001140 (-) 174 WP_012118314.1 competence pheromone ComX -
  AB0R74_RS14750 (AB0R74_14750) - 3001109..3001969 (-) 861 WP_157774448.1 polyprenyl synthetase family protein -
  AB0R74_RS14755 (AB0R74_14755) degQ 3002177..3002317 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  AB0R74_RS14760 (AB0R74_14760) - 3002782..3003123 (+) 342 WP_069006914.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24271.68 Da        Isoelectric Point: 4.9953

>NTDB_id=1019411 AB0R74_RS14735 WP_003152052.1 2997928..2998572(-) (comA) [Bacillus velezensis strain JJ1043]
MKKILVIDDHPAVMEGTKTILETDTNLSVDCLSPDASEQFVLRHDFSAYDLILMDLNLGDDISGIELSKKILKENPLCKI
IVYTGYEVEDYFEESIRAGLHGAISKTESKEKIMQYIYHVLNGQILVDFSYFKQLMTQQKTKTSSSPQSEQDRLTPRERH
ILQEVEKGLTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDNVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=1019411 AB0R74_RS14735 WP_003152052.1 2997928..2998572(-) (comA) [Bacillus velezensis strain JJ1043]
ATGAAAAAGATACTAGTGATTGATGATCATCCAGCTGTCATGGAGGGCACCAAGACGATTCTGGAAACGGACACGAATCT
TTCTGTCGATTGCCTCAGTCCTGATGCCAGTGAACAATTCGTTCTCCGGCATGATTTTTCAGCTTACGATCTCATATTAA
TGGATTTAAATCTGGGTGATGACATCAGCGGCATAGAGCTTTCTAAGAAAATCTTAAAAGAGAATCCTCTCTGTAAAATC
ATTGTCTACACAGGCTATGAGGTTGAAGATTATTTTGAAGAATCCATCCGCGCGGGCCTGCATGGCGCCATCAGCAAAAC
CGAATCTAAAGAGAAAATCATGCAATACATATATCACGTGCTCAACGGACAGATTTTAGTTGATTTCTCCTATTTCAAAC
AGCTGATGACCCAGCAAAAAACAAAAACGTCTTCTTCCCCTCAAAGTGAGCAGGATCGGTTAACCCCGAGAGAGCGCCAT
ATTCTCCAAGAGGTCGAAAAAGGTTTGACCAATCAGGAAATCGCAGATGCACTTCACTTAAGCAAGCGGTCAATTGAATA
CAGCCTGACATCCATTTTTAACAAGCTGAATGTCGGCTCCCGCACTGAAGCGGTGCTGATCGCCAAGTCAGATAACGTAC
TATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-117)

Bacterial regulatory proteins, luxR family (GerE)

(153-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

86.449

100

0.864

Multiple sequence alignment