Detailed information NTG1019361

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AB0R74_RS01975
• Genome accession: NZ_CP160216
• Coordinates: 390348..391496 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain JJ1043
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 385348..396496

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R74_RS01955 (AB0R74_01955)	-	385769..386452 (-)	684	WP_007410265.1	ABC transporter ATP-binding protein	-
AB0R74_RS01960 (AB0R74_01960)	-	386467..387879 (-)	1413	WP_047935211.1	ABC transporter permease	-
AB0R74_RS01965 (AB0R74_01965)	-	388092..388775 (+)	684	WP_042634825.1	response regulator transcription factor	-
AB0R74_RS01970 (AB0R74_01970)	-	388762..390195 (+)	1434	WP_162303988.1	HAMP domain-containing sensor histidine kinase	-
AB0R74_RS01975 (AB0R74_01975)	rapC	390348..391496 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
AB0R74_RS01980 (AB0R74_01980)	phrC	391480..391599 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
AB0R74_RS01985 (AB0R74_01985)	-	391747..391842 (-)	96	WP_021495118.1	YjcZ family sporulation protein	-
AB0R74_RS01990 (AB0R74_01990)	-	391937..393301 (-)	1365	WP_015239155.1	aspartate kinase	-
AB0R74_RS01995 (AB0R74_01995)	ceuB	393715..394668 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
AB0R74_RS02000 (AB0R74_02000)	-	394658..395605 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
AB0R74_RS02005 (AB0R74_02005)	-	395599..396357 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=1019361 AB0R74_RS01975 WP_007410270.1 390348..391496(+) (rapC) [Bacillus velezensis strain JJ1043]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1019361 AB0R74_RS01975 WP_007410270.1 390348..391496(+) (rapC) [Bacillus velezensis strain JJ1043]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCAGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTATACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568