Detailed information NTG1019285

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AB0R81_RS02005
• Genome accession: NZ_CP160215
• Coordinates: 394622..395770 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain JJ213
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 389622..400770

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R81_RS01985 (AB0R81_01985)	-	390019..390702 (-)	684	WP_059366584.1	ABC transporter ATP-binding protein	-
AB0R81_RS01990 (AB0R81_01990)	-	390717..392153 (-)	1437	WP_076425710.1	ABC transporter permease	-
AB0R81_RS01995 (AB0R81_01995)	-	392366..393049 (+)	684	WP_007410267.1	response regulator transcription factor	-
AB0R81_RS02000 (AB0R81_02000)	-	393036..394469 (+)	1434	WP_162992601.1	HAMP domain-containing sensor histidine kinase	-
AB0R81_RS02005 (AB0R81_02005)	rapC	394622..395770 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
AB0R81_RS02010 (AB0R81_02010)	phrC	395754..395873 (+)	120	WP_033575081.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
AB0R81_RS02015 (AB0R81_02015)	-	396021..396116 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
AB0R81_RS02020 (AB0R81_02020)	-	396211..397575 (-)	1365	WP_059366589.1	aspartate kinase	-
AB0R81_RS02025 (AB0R81_02025)	ceuB	397989..398942 (+)	954	WP_059366593.1	ABC transporter permease	Machinery gene
AB0R81_RS02030 (AB0R81_02030)	-	398932..399879 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
AB0R81_RS02035 (AB0R81_02035)	-	399873..400631 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=1019285 AB0R81_RS02005 WP_007410270.1 394622..395770(+) (rapC) [Bacillus velezensis strain JJ213]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1019285 AB0R81_RS02005 WP_007410270.1 394622..395770(+) (rapC) [Bacillus velezensis strain JJ213]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGATTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568