Detailed information NTG1019281

Bioinformatically predicted

Overview

• Name: rexA
• Type: Machinery gene
• Locus tag: DQM48_RS03315
• Genome accession: NZ_LS483348
• Coordinates: 623228..626854 (+)
• Length: 1208 a.a.
• NCBI ID: WP_111698370.1
• Uniprot ID: -
• Organism: Streptococcus lutetiensis strain NCTC8738
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 618228..631854

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM48_RS03310 (NCTC8738_00678)	rexB	619996..623238 (+)	3243	WP_111698368.1	ATP-dependent nuclease subunit B	Machinery gene
DQM48_RS03315 (NCTC8738_00679)	rexA	623228..626854 (+)	3627	WP_111698370.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
DQM48_RS03320 (NCTC8738_00680)	-	626949..628094 (-)	1146	WP_111698372.1	cobalamin-independent methionine synthase II family protein	-
DQM48_RS03325 (NCTC8738_00681)	-	628282..628722 (+)	441	WP_111698375.1	cytidine deaminase family protein	-
DQM48_RS03330 (NCTC8738_00682)	-	628751..629485 (+)	735	WP_020916504.1	PHP domain-containing protein	-
DQM48_RS03335 (NCTC8738_00683)	-	629543..629719 (-)	177	WP_020916505.1	DUF3042 family protein	-
DQM48_RS03340 (NCTC8738_00684)	miaA	629907..630806 (+)	900	WP_061407475.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-

Sequence

Protein

• Length: 1208 a.a.
• Molecular weight: 138424.71 Da
• Isoelectric Point: 5.1327

>NTDB_id=1019281 DQM48_RS03315 WP_111698370.1 623228..626854(+) (rexA) [Streptococcus lutetiensis strain NCTC8738]
MIFKPFLTAEAISSLQQKEAQSSKAQKRTPEQIEAIYSYGNNILVSASAGSGKTFVMVERIIDKILRGITVDQLFISTFT
VKAAGELKERLEKKISQALQQATHNDLKAYLNEQLLALQTADIGTMDAFTQKLVNQYGYTLGISPTFRIMTDKSEQDLVK
NDVFADLFADYMTGQKQDIFRKLVRNFSGNRKDTTAFRGIVYKIYDFIQATDNPKKWLSEVFLKGARTYTDFSAIPDQEV
VDFLACMHETANQLQDVTDLEDYKQKTAKGTPTAAYKKHLNMIEHLHEWALHFETLYGRDGLGRLATDVADLIPSSPAVT
VAGVKYPIFKTLQGRLAGLKHLETIFKYQSESLPLLELLQAFMQDFSEQYLQAKIQENAFEFSDIAHFAIQILEENPDIR
ELYQDKYHEVMVDEYQDNNHTQERMLELLSNGHNRFMVGDIKQSIYRFRQADPQIFNQKFKDFQEHPEHGKLILLKENFR
SQSEVLDTTNSVFTHLMDESVGEILYDGMHQLVAGSPAQKEAHPENKTQVLIYDTDDGSELASSPEEEQINPNEVKLVAK
EIIRLHNEEGVAFEDITLLVSSRTRNDGILQTFEHYGIPLVTDGGEQNYLKSVEVMVMLDTLRALDNPLNDYALVALMRS
PMFSFNEDDLARLALQTSEDETRANLYQKLEHALANQGQHAELVTPVLREKLKDFMTCFSKWRDFAKWHSLYDLIWKIYN
ERFYYDYVGNLPRAEQRQANLYALALRANNFEKTGFKGLSRFIRMIDRVLESENDLADVEVALPKHAVNLMTIHKSKGLE
FKYVFILNIDKKFSIQDMMSPLILSRQNGAGIKYLADMREELDTDVFPTVKVSMDTLPYQLNKRELRLATLSEQMRLFYV
AMTRAEKKLYLVGKASSEKLVDKYSGKLENNHLPVAEREAFMTFQDWMLAIHEAYKDLPFKVEFVTDEDLTEEKIGQIEV
KSAIKPDDLSNNRQSENIAEALERLEAVAELNTKYQSAINLPSLRTPSQVKKLYELVMDTDGVDVMAKKDQVKPSFALPD
FSKKAKVEATAIGSAMHELMQRISLSQKVTLEDISKALTQVSAKDEVKARIHLENVLDFFENSALGQLIQQNTDKIYREA
PFAMLKEDPESKEKFVVRGIVDAYLILEDRLVLLDYKTDKYTNSEEIKDRYQGQMALYAEALSKSYHIDQVDKYLVLLGG
ECLEVVKL

Nucleotide

• Length: 3627 bp

>NTDB_id=1019281 DQM48_RS03315 WP_111698370.1 623228..626854(+) (rexA) [Streptococcus lutetiensis strain NCTC8738]
ATGATCTTTAAACCATTTTTAACGGCTGAAGCGATTTCTTCTCTACAGCAAAAAGAGGCTCAGTCATCAAAAGCGCAAAA
ACGAACACCTGAACAAATTGAAGCCATTTATAGCTATGGCAACAATATTTTGGTATCAGCGTCGGCTGGTTCTGGGAAAA
CTTTCGTCATGGTTGAGCGCATTATTGATAAAATTTTGCGTGGGATTACTGTTGACCAGCTCTTTATTTCGACCTTTACA
GTTAAAGCAGCGGGAGAATTAAAAGAACGTCTTGAGAAAAAAATCAGCCAAGCTTTGCAACAAGCGACGCATAATGATTT
AAAAGCCTATCTTAATGAGCAGCTGCTAGCTCTGCAGACTGCTGATATTGGAACCATGGATGCCTTTACGCAAAAGTTGG
TTAACCAATACGGCTACACATTAGGAATTTCACCGACTTTTCGCATTATGACGGATAAGAGCGAACAAGATCTTGTCAAG
AATGACGTTTTTGCAGATCTTTTTGCAGATTACATGACGGGGCAAAAGCAAGACATTTTCCGCAAATTAGTTCGTAATTT
TTCTGGCAATCGTAAAGATACCACAGCTTTTAGAGGAATTGTTTACAAAATCTATGATTTCATTCAAGCAACGGATAATC
CTAAGAAATGGCTGTCTGAGGTTTTCTTGAAAGGTGCTAGAACCTATACTGATTTTTCCGCCATTCCCGACCAAGAAGTT
GTGGATTTTCTAGCTTGCATGCATGAGACAGCTAATCAATTACAAGATGTGACGGATTTAGAAGATTACAAGCAAAAAAC
AGCTAAGGGGACGCCTACAGCGGCTTATAAAAAGCATTTGAACATGATTGAGCATTTGCATGAGTGGGCTTTGCATTTTG
AGACGCTTTACGGTCGTGATGGACTTGGTCGTTTGGCGACAGATGTGGCTGACTTGATTCCATCTAGTCCAGCTGTGACA
GTTGCAGGGGTAAAATATCCAATTTTCAAGACTCTCCAAGGTCGTTTGGCTGGTCTGAAACACTTAGAAACTATCTTCAA
ATACCAATCGGAAAGTCTGCCTTTGTTAGAACTTTTACAAGCGTTTATGCAGGATTTCTCTGAACAATATTTGCAAGCTA
AAATTCAAGAAAATGCTTTTGAGTTTTCGGATATCGCTCATTTTGCTATCCAGATTTTGGAAGAAAATCCAGATATTCGT
GAGCTCTACCAAGATAAATACCACGAAGTCATGGTCGATGAGTACCAAGATAACAATCACACGCAAGAACGCATGCTTGA
ATTATTGTCAAATGGTCATAATCGATTCATGGTGGGAGATATCAAGCAATCTATCTATCGTTTTCGTCAGGCTGATCCGC
AGATTTTTAACCAAAAATTCAAGGATTTTCAAGAGCATCCAGAACATGGAAAATTAATTCTGCTAAAAGAAAACTTCCGT
AGTCAGTCAGAAGTCTTGGATACGACAAATAGTGTCTTTACGCATTTGATGGACGAGTCTGTTGGGGAAATTTTGTATGA
TGGCATGCACCAGTTAGTAGCAGGCAGTCCCGCACAAAAAGAAGCTCATCCAGAAAATAAAACACAAGTCCTTATTTACG
ATACTGATGATGGTAGTGAACTTGCAAGTAGTCCAGAAGAGGAGCAAATCAATCCAAACGAGGTTAAGCTGGTAGCTAAA
GAAATTATTCGCCTGCATAACGAAGAAGGTGTTGCCTTTGAAGACATCACGTTGCTAGTTTCATCACGTACGCGTAATGA
TGGTATTTTGCAGACTTTTGAACATTATGGTATTCCTTTGGTGACGGATGGCGGTGAGCAAAATTACCTAAAATCTGTTG
AAGTTATGGTGATGCTAGATACCCTTCGAGCTCTGGATAATCCGCTTAATGATTATGCTTTGGTAGCTCTGATGCGTTCA
CCAATGTTTTCTTTTAACGAAGATGATCTTGCTCGTCTTGCTCTTCAAACAAGCGAGGATGAGACCAGAGCCAATCTTTA
CCAAAAACTAGAACATGCTTTGGCTAATCAAGGTCAGCATGCAGAATTGGTCACACCAGTTTTACGTGAAAAATTAAAAG
ATTTTATGACTTGCTTTAGCAAGTGGCGTGATTTTGCCAAATGGCATTCGCTTTATGATTTGATTTGGAAGATTTACAAT
GAGCGCTTTTATTATGATTACGTGGGCAATCTCCCCCGTGCCGAGCAGCGCCAAGCCAATCTTTACGCCCTTGCACTTCG
TGCTAATAATTTTGAAAAGACTGGCTTTAAAGGCTTATCACGCTTTATTCGCATGATTGATCGCGTCTTAGAAAGTGAAA
ATGATTTGGCTGACGTTGAAGTGGCCCTTCCAAAACATGCTGTGAATTTGATGACTATCCATAAGAGTAAAGGACTTGAA
TTCAAGTATGTCTTTATTTTGAACATTGATAAGAAATTCAGTATTCAAGACATGATGTCACCCTTGATTTTGTCACGTCA
AAATGGAGCTGGTATCAAATATTTGGCTGACATGCGAGAAGAGTTAGATACGGATGTTTTTCCAACCGTTAAAGTCAGCA
TGGACACTTTACCTTATCAGCTTAATAAACGTGAACTACGCCTAGCAACCTTGTCTGAACAAATGCGTTTGTTCTATGTT
GCCATGACCCGTGCTGAGAAGAAATTGTATTTAGTCGGAAAAGCAAGTTCTGAAAAATTGGTTGATAAATACAGCGGTAA
GTTAGAAAATAATCATCTTCCAGTTGCAGAACGTGAAGCTTTCATGACTTTCCAAGATTGGATGTTGGCCATTCATGAAG
CTTATAAGGACTTACCATTTAAGGTTGAATTTGTCACAGATGAAGATCTGACAGAAGAGAAAATCGGTCAGATTGAAGTC
AAATCAGCTATTAAACCTGATGATTTGTCAAATAACCGCCAGTCAGAAAATATTGCAGAAGCTTTGGAGAGACTTGAGGC
AGTTGCAGAGTTGAATACCAAATATCAATCAGCCATTAACCTGCCAAGCTTAAGAACACCTAGTCAGGTTAAGAAACTTT
ATGAGCTTGTTATGGATACTGATGGTGTTGATGTGATGGCTAAGAAGGACCAAGTAAAACCAAGCTTTGCCTTACCTGAT
TTTTCGAAAAAAGCCAAGGTTGAAGCAACAGCGATTGGTTCTGCCATGCACGAGCTCATGCAGCGCATTTCCTTGTCTCA
AAAAGTGACACTAGAGGATATTTCAAAAGCTCTAACACAAGTGTCTGCTAAAGATGAAGTTAAAGCGCGCATTCATCTAG
AAAATGTTTTGGATTTCTTTGAAAATTCAGCTCTTGGACAATTGATTCAGCAAAATACTGACAAAATCTACCGCGAAGCT
CCATTTGCTATGCTAAAAGAAGACCCTGAGAGCAAAGAAAAATTTGTTGTTCGTGGGATTGTCGATGCTTATCTTATTTT
AGAGGATCGTTTGGTTCTTTTAGATTACAAGACTGATAAATACACAAATAGCGAGGAAATCAAAGACCGATACCAAGGTC
AAATGGCACTTTATGCCGAAGCACTCAGCAAGTCATATCATATTGATCAAGTTGATAAATACCTTGTTTTACTTGGTGGA
GAGTGTCTGGAAGTAGTTAAACTTTAA

Domains

Predicted by InterProScan.

• UvrD-like helicase C-terminal domain (UvrD_C) (473-892)

• UvrD/REP helicase N-terminal domain (UvrD-helicase) (29-464)

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (1044-1185)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexA	Streptococcus pneumoniae R6	52.998	100	0.541