Detailed information NTG1019268

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AB0R66_RS18235
• Genome accession: NZ_CP160214
• Coordinates: 3685487..3686650 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain JJ747
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3680487..3691650

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R66_RS18205 (AB0R66_18205)	-	3680751..3681170 (-)	420	WP_025285352.1	TIGR03826 family flagellar region protein	-
AB0R66_RS18210 (AB0R66_18210)	comFC	3681244..3681933 (-)	690	WP_217898730.1	phosphoribosyltransferase family protein	Machinery gene
AB0R66_RS18215 (AB0R66_18215)	-	3681939..3682223 (-)	285	WP_007407481.1	competence protein ComFB	-
AB0R66_RS18220 (AB0R66_18220)	comFA	3682281..3683666 (-)	1386	WP_094032535.1	DEAD/DEAH box helicase	Machinery gene
AB0R66_RS18225 (AB0R66_18225)	-	3683775..3684623 (-)	849	WP_003151387.1	DegV family protein	-
AB0R66_RS18230 (AB0R66_18230)	degU	3684721..3685410 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
AB0R66_RS18235 (AB0R66_18235)	degS	3685487..3686650 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
AB0R66_RS18240 (AB0R66_18240)	-	3686873..3687520 (+)	648	WP_061581228.1	YigZ family protein	-
AB0R66_RS18245 (AB0R66_18245)	-	3687525..3688760 (+)	1236	WP_025285355.1	LCP family protein	-
AB0R66_RS18250 (AB0R66_18250)	-	3688859..3689935 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
AB0R66_RS18255 (AB0R66_18255)	-	3690068..3691264 (-)	1197	WP_094032536.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=1019268 AB0R66_RS18235 WP_007407484.1 3685487..3686650(-) (degS) [Bacillus velezensis strain JJ747]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1019268 AB0R66_RS18235 WP_007407484.1 3685487..3686650(-) (degS) [Bacillus velezensis strain JJ747]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951