Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   AB0R80_RS15820 Genome accession   NZ_CP160213
Coordinates   3198891..3201191 (-) Length   766 a.a.
NCBI ID   WP_327935464.1    Uniprot ID   -
Organism   Bacillus velezensis strain JM199     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3193891..3206191
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R80_RS15780 (AB0R80_15780) - 3194351..3194782 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  AB0R80_RS15785 (AB0R80_15785) - 3194782..3195123 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  AB0R80_RS15790 (AB0R80_15790) - 3195116..3196597 (+) 1482 WP_327935465.1 Na+/H+ antiporter subunit D -
  AB0R80_RS15795 (AB0R80_15795) - 3196603..3197079 (+) 477 WP_007613428.1 Na+/H+ antiporter subunit E -
  AB0R80_RS15800 (AB0R80_15800) - 3197079..3197363 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  AB0R80_RS15805 (AB0R80_15805) mnhG 3197347..3197721 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  AB0R80_RS15810 (AB0R80_15810) - 3197761..3198144 (-) 384 WP_007613430.1 hotdog fold thioesterase -
  AB0R80_RS15815 (AB0R80_15815) comA 3198166..3198810 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  AB0R80_RS15820 (AB0R80_15820) comP 3198891..3201191 (-) 2301 WP_327935464.1 histidine kinase Regulator
  AB0R80_RS15825 (AB0R80_15825) comX 3201205..3201378 (-) 174 WP_012118314.1 competence pheromone ComX -
  AB0R80_RS15830 (AB0R80_15830) - 3201347..3202207 (-) 861 WP_327935463.1 polyprenyl synthetase family protein -
  AB0R80_RS15835 (AB0R80_15835) degQ 3202415..3202555 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  AB0R80_RS15840 (AB0R80_15840) - 3203018..3203359 (+) 342 WP_095352717.1 hypothetical protein -
  AB0R80_RS15845 (AB0R80_15845) - 3203366..3204589 (-) 1224 WP_015418108.1 EAL and HDOD domain-containing protein -
  AB0R80_RS15850 (AB0R80_15850) - 3204719..3206185 (-) 1467 WP_015418109.1 nicotinate phosphoribosyltransferase -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88330.57 Da        Isoelectric Point: 7.1786

>NTDB_id=1019186 AB0R80_RS15820 WP_327935464.1 3198891..3201191(-) (comP) [Bacillus velezensis strain JM199]
MKLSKNTYSILLILLSLSYIFYLTYINVNNLFVGATANVNNKNQIEITKVSDYTMAYYAGVKKGDIVIKINQNKSVEPKD
LKQNTLKNVRSMTVERSGEIVDLKNLSLLSEDNLFVYLIPVIFFFVCLSCIILILKINKEQDSVSAFILIIFLLTTGIAY
VSAGGSSKGDIISRYVNVITLISVPVNYLLFIYQYIKEFGYKIFNGKVFVALYTVPVINIILEFFRHCFERGVVGKVNLV
SISLLYLIALFFITVGLIKYKKTEQANILKTFLLINIFAFSPFVFLYVAPYIIFNDYYVSSFLVAPFLLLIPFSLVYQFM
TNKIYEIDFIIGRLKYYSLLAVTPTLLIITIYDLVQDPNSEFYTFKLTLLTYIIMLAVFYSKEILDFRFRLKRFSEKHNY
QDSIFKFTQIIKGASSLKQVFTELESTLLEVLMVSKVCVLEVEGDLNVRYFFNDNEKKLWEPYSHQLAETTSEIGKIVQV
DKGFLMKVGERGTKSYIVLCLSFMNTPKLTWDEISWLKTLSFYTSITMENVLKIEELMNHLEDLKKQETNPVWLKKLMFT
IEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGL
VKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGC
NQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKVDIEMEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=1019186 AB0R80_RS15820 WP_327935464.1 3198891..3201191(-) (comP) [Bacillus velezensis strain JM199]
ATGAAGTTATCTAAAAATACGTATTCCATTTTATTAATTTTACTCAGCTTGTCTTATATTTTCTATTTAACTTATATAAA
TGTAAATAATTTATTTGTAGGAGCCACCGCAAATGTTAATAATAAGAATCAAATAGAGATTACCAAAGTATCAGATTACA
CAATGGCTTATTATGCTGGTGTTAAAAAAGGTGACATTGTAATTAAAATTAATCAGAATAAGAGCGTTGAACCAAAAGAT
TTAAAACAAAATACATTGAAAAACGTAAGGTCTATGACAGTTGAAAGATCTGGTGAAATAGTTGATCTGAAAAATTTAAG
TTTATTAAGTGAAGACAACTTATTTGTTTATTTAATACCTGTTATTTTTTTCTTTGTATGCCTTAGTTGTATTATCCTTA
TTTTGAAAATTAATAAGGAGCAAGATTCAGTTTCAGCTTTTATATTGATCATCTTTTTACTCACTACTGGTATAGCATAT
GTAAGTGCGGGAGGTTCATCAAAAGGAGATATAATAAGCCGATACGTCAATGTCATAACTTTAATATCCGTACCGGTAAA
TTATCTCTTGTTTATTTATCAATATATCAAAGAATTTGGATACAAGATTTTTAACGGGAAAGTTTTTGTTGCTTTATATA
CAGTCCCTGTTATTAATATAATACTAGAGTTTTTTAGGCATTGCTTTGAAAGAGGAGTAGTGGGGAAAGTTAATTTAGTA
TCAATATCTCTCCTTTATTTAATAGCTTTATTTTTCATTACTGTAGGTTTAATAAAGTACAAAAAAACAGAGCAAGCAAA
TATTCTTAAGACTTTTCTTTTAATTAATATTTTTGCTTTCTCACCATTTGTATTTTTGTATGTGGCACCCTACATCATTT
TTAATGACTATTATGTTTCTTCTTTTTTAGTTGCGCCTTTTCTTTTATTAATTCCTTTTTCTTTAGTTTATCAATTTATG
ACTAATAAAATCTATGAAATTGATTTTATTATTGGGCGGTTGAAATATTATAGTCTTTTAGCTGTCACTCCTACTTTACT
TATTATTACAATTTATGATCTTGTACAAGATCCAAACTCAGAGTTTTATACGTTTAAACTAACTTTGCTGACATATATTA
TTATGTTGGCTGTGTTTTATTCAAAAGAGATCTTAGATTTTCGTTTCCGTTTAAAGCGTTTTTCTGAAAAACATAATTAT
CAGGACAGCATATTCAAGTTTACTCAAATAATTAAAGGAGCTTCATCCTTAAAGCAAGTATTCACTGAACTTGAATCTAC
TCTACTTGAAGTTTTGATGGTTAGTAAAGTATGTGTTTTAGAGGTAGAAGGAGACTTAAATGTAAGGTATTTTTTTAATG
ATAATGAGAAAAAATTATGGGAGCCGTATTCTCATCAATTAGCTGAAACGACAAGCGAAATTGGCAAGATAGTTCAGGTG
GATAAAGGGTTTTTAATGAAAGTAGGGGAACGGGGCACTAAATCATACATTGTACTGTGTTTATCATTTATGAATACTCC
GAAACTAACTTGGGATGAGATTTCTTGGTTAAAAACCTTATCATTCTACACCAGTATTACGATGGAGAATGTGCTTAAAA
TCGAAGAACTTATGAATCATCTCGAAGATTTAAAGAAACAAGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACG
ATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAAGCGCCA
GTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATG
AGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTGCGTCCTCAGCTGCTGTATGATTTGGGTCTG
GTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTAC
GGCGGCTCTGGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCAC
AGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGATGC
AATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGGGCGCTTGACGGACG
GATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGTAGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(566-635)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.471

99.869

0.564


Multiple sequence alignment