Detailed information NTG1019117

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AB0R70_RS16845
• Genome accession: NZ_CP160212
• Coordinates: 3413145..3414308 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain JM204
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3408145..3419308

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R70_RS16815 (AB0R70_16815)	-	3408409..3408828 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
AB0R70_RS16820 (AB0R70_16820)	comFC	3408902..3409591 (-)	690	WP_197200179.1	double zinc ribbon domain-containing protein	Machinery gene
AB0R70_RS16825 (AB0R70_16825)	-	3409597..3409881 (-)	285	WP_007407481.1	competence protein ComFB	-
AB0R70_RS16830 (AB0R70_16830)	comFA	3409939..3411324 (-)	1386	WP_220007557.1	DEAD/DEAH box helicase	Machinery gene
AB0R70_RS16835 (AB0R70_16835)	-	3411433..3412281 (-)	849	WP_327975732.1	DegV family protein	-
AB0R70_RS16840 (AB0R70_16840)	degU	3412379..3413068 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
AB0R70_RS16845 (AB0R70_16845)	degS	3413145..3414308 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
AB0R70_RS16850 (AB0R70_16850)	-	3414531..3415178 (+)	648	WP_061581228.1	YigZ family protein	-
AB0R70_RS16855 (AB0R70_16855)	-	3415183..3416403 (+)	1221	WP_220007558.1	LCP family protein	-
AB0R70_RS16860 (AB0R70_16860)	-	3416503..3417579 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
AB0R70_RS16865 (AB0R70_16865)	-	3417712..3418908 (-)	1197	WP_327975734.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=1019117 AB0R70_RS16845 WP_007407484.1 3413145..3414308(-) (degS) [Bacillus velezensis strain JM204]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1019117 AB0R70_RS16845 WP_007407484.1 3413145..3414308(-) (degS) [Bacillus velezensis strain JM204]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGACCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951