Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   AB0R79_RS16150 Genome accession   NZ_CP160211
Coordinates   3228228..3230525 (-) Length   765 a.a.
NCBI ID   WP_366597590.1    Uniprot ID   -
Organism   Bacillus velezensis strain JM236     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3223228..3235525
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R79_RS16110 (AB0R79_16110) - 3223688..3224119 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  AB0R79_RS16115 (AB0R79_16115) - 3224119..3224460 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  AB0R79_RS16120 (AB0R79_16120) - 3224453..3225934 (+) 1482 WP_007408671.1 Na+/H+ antiporter subunit D -
  AB0R79_RS16125 (AB0R79_16125) - 3225940..3226416 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  AB0R79_RS16130 (AB0R79_16130) - 3226416..3226700 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  AB0R79_RS16135 (AB0R79_16135) mnhG 3226684..3227058 (+) 375 WP_167340837.1 monovalent cation/H(+) antiporter subunit G -
  AB0R79_RS16140 (AB0R79_16140) - 3227098..3227481 (-) 384 WP_012118312.1 hotdog fold thioesterase -
  AB0R79_RS16145 (AB0R79_16145) comA 3227503..3228147 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  AB0R79_RS16150 (AB0R79_16150) comP 3228228..3230525 (-) 2298 WP_366597590.1 sensor histidine kinase Regulator
  AB0R79_RS16155 (AB0R79_16155) comX 3230544..3230720 (-) 177 WP_015240484.1 competence pheromone ComX -
  AB0R79_RS16160 (AB0R79_16160) - 3230735..3231610 (-) 876 WP_025285191.1 polyprenyl synthetase family protein -
  AB0R79_RS16165 (AB0R79_16165) degQ 3231762..3231902 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  AB0R79_RS16170 (AB0R79_16170) - 3232367..3232708 (+) 342 WP_167340838.1 hypothetical protein -
  AB0R79_RS16175 (AB0R79_16175) - 3232715..3233938 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 765 a.a.        Molecular weight: 89092.15 Da        Isoelectric Point: 8.3250

>NTDB_id=1019034 AB0R79_RS16150 WP_366597590.1 3228228..3230525(-) (comP) [Bacillus velezensis strain JM236]
MKKFIRNFSIVLLFVSLFYVAHIIYFTQNGILVGTYVVENNNHELQVVKLSKSTYGKYMGLKEGDRIIEISGKIPTEENI
KGQYLAKAEHMKIIRDNHKIDLHNTEFISLNSSYSFFIYIIPCILFALSLLCIFYIYKVNRVKDTYSAYILIIFLLFTSI
AYLSAGGVTRGYEINRYINLFTFLNVPVLYYHFLYQYFKELKIKFSSGYVVSALYILPVINIIIEIFQNHFAFQLVTNIN
LGTFFLEMMVVYTVIIFYGLVYRKKDHFYLLKVLLISNTIAFFPFTVFYIIPEVLFGRYIYSAIVTSPFIIIIPLALVYQ
FVVNKIYDIDFLLGRIRYYGFLSIVPTIGVVWLNILFDSKGNNFNIIQITVYVFLIFLAVFYIKELLDYKFRLKRFSEKY
NYQDSIYKYTQLLKSVSALNQVFMNLKKTILDVLPVSKAYIFEINSDGDILYFDKQNSEPNWQPYKKEFVKVTSEIGKII
EVNQGFLMKIGERGANSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENILQIEELMNHLQDLKQQGSNPVWLKKLM
FTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDL
GLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLISIQNKVILHYEDDGVGFN
QEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2298 bp        

>NTDB_id=1019034 AB0R79_RS16150 WP_366597590.1 3228228..3230525(-) (comP) [Bacillus velezensis strain JM236]
TTGAAAAAATTCATTAGAAATTTTTCGATTGTATTGTTATTCGTCAGTCTCTTTTACGTTGCTCATATTATATATTTTAC
TCAAAACGGAATTTTGGTAGGAACCTATGTGGTTGAAAACAATAACCATGAATTACAGGTTGTAAAACTCTCCAAGTCTA
CGTATGGTAAATATATGGGCTTAAAAGAGGGAGACAGGATAATTGAAATAAGCGGAAAAATACCGACAGAAGAGAATATA
AAAGGTCAATATCTAGCGAAAGCTGAACATATGAAAATTATAAGGGATAACCATAAAATAGACCTACATAATACGGAATT
TATTTCCTTGAACAGCTCTTATAGCTTTTTTATTTATATTATCCCGTGCATATTGTTTGCTTTAAGCTTGTTGTGTATTT
TTTACATTTATAAAGTTAACAGAGTAAAAGATACTTATTCAGCCTATATTTTAATTATCTTTTTATTATTTACATCTATT
GCTTATTTAAGCGCAGGTGGAGTAACTAGAGGGTATGAAATAAACAGATATATTAACCTTTTTACGTTTTTGAATGTACC
TGTACTATACTATCACTTTCTTTATCAATATTTTAAAGAATTAAAAATAAAGTTTTCATCTGGTTATGTTGTGTCTGCTT
TATATATTTTGCCGGTTATTAATATAATAATTGAGATATTCCAAAACCATTTTGCTTTTCAACTTGTTACGAATATTAAT
TTAGGAACATTTTTTTTGGAAATGATGGTTGTTTACACGGTTATTATTTTTTATGGACTAGTCTATAGAAAAAAGGATCA
CTTTTATTTGTTGAAAGTGTTACTTATATCTAACACCATAGCTTTTTTCCCTTTTACAGTTTTTTATATTATACCTGAGG
TATTGTTCGGACGGTATATTTATTCTGCTATAGTGACGTCACCGTTTATAATTATTATTCCGTTAGCGTTAGTCTACCAA
TTCGTGGTCAATAAAATCTATGATATAGATTTTTTGTTAGGCAGAATCAGGTACTATGGTTTCCTTTCCATTGTTCCGAC
TATTGGAGTTGTTTGGCTGAATATATTATTCGACAGCAAGGGGAATAACTTTAACATTATTCAAATCACTGTATATGTAT
TTTTGATTTTTTTAGCGGTATTTTATATTAAGGAGTTATTAGACTACAAATTCCGCCTGAAACGTTTTTCAGAAAAATAT
AATTATCAAGACAGCATTTATAAATATACACAGCTTCTTAAAAGCGTATCAGCTTTAAATCAAGTGTTTATGAATTTGAA
AAAGACTATTTTGGACGTCTTGCCTGTTAGTAAAGCTTATATATTTGAAATCAATTCTGACGGAGACATTCTGTATTTTG
ATAAACAGAACAGTGAACCGAACTGGCAGCCGTATAAAAAAGAATTTGTTAAAGTCACATCAGAGATTGGAAAGATTATT
GAAGTAAATCAAGGTTTTCTGATGAAGATTGGAGAAAGAGGGGCAAACTCATACGTTCTGCTTTGTTTGTCGAGCATTAA
TACTCCGAGACTGACAAGAGATGAGATATCTTGGTTAAAGACATTGTCTTTTTATACAAGTGTTTCGATGGAAAACATAT
TGCAGATCGAAGAACTCATGAACCATTTACAAGATCTAAAACAACAAGGCTCAAACCCGGTCTGGCTAAAAAAGCTGATG
TTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAA
GCGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGA
TGAATGAGCAGATGTCCGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTG
GGCCTGGTCAAGGCGGTATCCAAGCTTGCCGCACAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCG
GTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGC
ATTCACAGGCGAATGAGGTGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGATTCAAT
CAGGAAGAAGGCGGCGGGCAGTCGATGAGTATGGGTCTTTCAGGTATTAAGGAGCGCGTCCGTGCGCTTGACGGACGGAT
GAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(568-637)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

58.755

100

0.592


Multiple sequence alignment