Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AB0R79_RS02005 Genome accession   NZ_CP160211
Coordinates   394541..395494 (+) Length   317 a.a.
NCBI ID   WP_015239156.1    Uniprot ID   A0AAP3YGS2
Organism   Bacillus velezensis strain JM236     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 389541..400494
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R79_RS01980 (AB0R79_01980) - 389588..391021 (+) 1434 WP_165913860.1 HAMP domain-containing sensor histidine kinase -
  AB0R79_RS01985 (AB0R79_01985) rapC 391174..392322 (+) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  AB0R79_RS01990 (AB0R79_01990) phrC 392306..392425 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  AB0R79_RS01995 (AB0R79_01995) - 392573..392668 (-) 96 WP_021495118.1 YjcZ family sporulation protein -
  AB0R79_RS02000 (AB0R79_02000) - 392763..394127 (-) 1365 WP_020955323.1 aspartate kinase -
  AB0R79_RS02005 (AB0R79_02005) ceuB 394541..395494 (+) 954 WP_015239156.1 ABC transporter permease Machinery gene
  AB0R79_RS02010 (AB0R79_02010) - 395484..396431 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  AB0R79_RS02015 (AB0R79_02015) - 396425..397183 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  AB0R79_RS02020 (AB0R79_02020) - 397205..398149 (+) 945 WP_007410275.1 siderophore ABC transporter substrate-binding protein -
  AB0R79_RS02025 (AB0R79_02025) - 398191..399615 (-) 1425 WP_167340479.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=1018985 AB0R79_RS02005 WP_015239156.1 394541..395494(+) (ceuB) [Bacillus velezensis strain JM236]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=1018985 AB0R79_RS02005 WP_015239156.1 394541..395494(+) (ceuB) [Bacillus velezensis strain JM236]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGGACGATGGACTGGGCAAGGCTCGGAATCTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGGAATTTCCTTTTCATGAAAATCCTCGAGAGGATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAATATTGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGATCTGATC
CAAAACCTGTCATCATGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCAGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGAGTGATTATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536

Multiple sequence alignment