Detailed information NTG1018983

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AB0R79_RS01985
• Genome accession: NZ_CP160211
• Coordinates: 391174..392322 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain JM236
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 386174..397322

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R79_RS01965 (AB0R79_01965)	-	386595..387278 (-)	684	WP_007410265.1	ABC transporter ATP-binding protein	-
AB0R79_RS01970 (AB0R79_01970)	-	387293..388705 (-)	1413	WP_167340478.1	ABC transporter permease	-
AB0R79_RS01975 (AB0R79_01975)	-	388918..389601 (+)	684	WP_007410267.1	response regulator transcription factor	-
AB0R79_RS01980 (AB0R79_01980)	-	389588..391021 (+)	1434	WP_165913860.1	HAMP domain-containing sensor histidine kinase	-
AB0R79_RS01985 (AB0R79_01985)	rapC	391174..392322 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
AB0R79_RS01990 (AB0R79_01990)	phrC	392306..392425 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
AB0R79_RS01995 (AB0R79_01995)	-	392573..392668 (-)	96	WP_021495118.1	YjcZ family sporulation protein	-
AB0R79_RS02000 (AB0R79_02000)	-	392763..394127 (-)	1365	WP_020955323.1	aspartate kinase	-
AB0R79_RS02005 (AB0R79_02005)	ceuB	394541..395494 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
AB0R79_RS02010 (AB0R79_02010)	-	395484..396431 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
AB0R79_RS02015 (AB0R79_02015)	-	396425..397183 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=1018983 AB0R79_RS01985 WP_007410270.1 391174..392322(+) (rapC) [Bacillus velezensis strain JM236]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1018983 AB0R79_RS01985 WP_007410270.1 391174..392322(+) (rapC) [Bacillus velezensis strain JM236]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTATACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568