Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   AB0R71_RS01830 Genome accession   NZ_CP160210
Coordinates   343979..344377 (-) Length   132 a.a.
NCBI ID   WP_007609299.1    Uniprot ID   -
Organism   Bacillus velezensis strain JM907     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 338979..349377
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R71_RS01805 (AB0R71_01805) - 339150..340352 (+) 1203 WP_069007411.1 GTP-binding protein -
  AB0R71_RS01810 (AB0R71_01810) - 340417..341553 (+) 1137 WP_220006961.1 zinc-dependent alcohol dehydrogenase -
  AB0R71_RS01815 (AB0R71_01815) - 341568..342002 (+) 435 WP_190664048.1 RDD family protein -
  AB0R71_RS01820 (AB0R71_01820) - 342075..342398 (+) 324 WP_327976111.1 YckD family protein -
  AB0R71_RS01825 (AB0R71_01825) - 342502..343938 (+) 1437 WP_076425807.1 glycoside hydrolase family 1 protein -
  AB0R71_RS01830 (AB0R71_01830) nin/comJ 343979..344377 (-) 399 WP_007609299.1 competence protein ComJ Regulator
  AB0R71_RS01835 (AB0R71_01835) nucA/comI 344398..344835 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  AB0R71_RS01840 (AB0R71_01840) hxlB 345194..345751 (-) 558 WP_007409354.1 6-phospho-3-hexuloisomerase -
  AB0R71_RS01845 (AB0R71_01845) hxlA 345748..346383 (-) 636 WP_015239130.1 3-hexulose-6-phosphate synthase -
  AB0R71_RS01850 (AB0R71_01850) - 346615..346977 (+) 363 WP_007409352.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14977.03 Da        Isoelectric Point: 4.9712

>NTDB_id=1018904 AB0R71_RS01830 WP_007609299.1 343979..344377(-) (nin/comJ) [Bacillus velezensis strain JM907]
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLFFHIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1018904 AB0R71_RS01830 WP_007609299.1 343979..344377(-) (nin/comJ) [Bacillus velezensis strain JM907]
TTGATTAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTTCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCCAAGCGGCTTTTCTTTCATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

75.758

100

0.758

Multiple sequence alignment