Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | AB0962_RS10995 | Genome accession | NZ_CP160130 |
| Coordinates | 2251612..2251992 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain AB37-AUFP | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2246612..2256992
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB0962_RS10965 (AB0962_10950) | tadA | 2246729..2247233 (-) | 505 | Protein_2141 | tRNA adenosine(34) deaminase TadA | - |
| AB0962_RS10970 (AB0962_10955) | - | 2247240..2248364 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| AB0962_RS10975 (AB0962_10960) | ung | 2248361..2249074 (-) | 714 | WP_029424376.1 | uracil-DNA glycosylase | - |
| AB0962_RS10980 (AB0962_10965) | - | 2249125..2249721 (-) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| AB0962_RS10985 (AB0962_10970) | gspK | 2249952..2250911 (-) | 960 | WP_029424377.1 | type II secretion system minor pseudopilin GspK | - |
| AB0962_RS10990 (AB0962_10975) | xcpW | 2250911..2251612 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| AB0962_RS10995 (AB0962_10980) | xcpV | 2251612..2251992 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| AB0962_RS11000 (AB0962_10985) | - | 2251982..2252536 (-) | 555 | WP_005128793.1 | type II secretion system protein | - |
| AB0962_RS11005 (AB0962_10990) | - | 2252546..2253154 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| AB0962_RS11010 (AB0962_10995) | - | 2253192..2253965 (-) | 774 | WP_000497295.1 | TatD family hydrolase | - |
| AB0962_RS11015 (AB0962_11000) | - | 2253983..2254324 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| AB0962_RS11020 (AB0962_11005) | - | 2254336..2255316 (-) | 981 | WP_001075409.1 | DNA polymerase III subunit delta' | - |
| AB0962_RS11025 (AB0962_11010) | kdsB | 2255328..2256089 (-) | 762 | WP_000680696.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1018243 AB0962_RS10995 WP_000836911.1 2251612..2251992(-) (xcpV) [Acinetobacter baumannii strain AB37-AUFP]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1018243 AB0962_RS10995 WP_000836911.1 2251612..2251992(-) (xcpV) [Acinetobacter baumannii strain AB37-AUFP]
ATGAAATCTAAAGGCTTTACCCTTTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACTAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTTTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACTAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |