Detailed information NTG1018242

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AB0962_RS10990
• Genome accession: NZ_CP160130
• Coordinates: 2250911..2251612 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain AB37-AUFP
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2245911..2256612

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0962_RS10960 (AB0962_10945)	-	2246216..2246659 (-)	444	WP_001246675.1	SRPBCC family protein	-
AB0962_RS10965 (AB0962_10950)	tadA	2246729..2247233 (-)	505	Protein_2141	tRNA adenosine(34) deaminase TadA	-
AB0962_RS10970 (AB0962_10955)	-	2247240..2248364 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
AB0962_RS10975 (AB0962_10960)	ung	2248361..2249074 (-)	714	WP_029424376.1	uracil-DNA glycosylase	-
AB0962_RS10980 (AB0962_10965)	-	2249125..2249721 (-)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
AB0962_RS10985 (AB0962_10970)	gspK	2249952..2250911 (-)	960	WP_029424377.1	type II secretion system minor pseudopilin GspK	-
AB0962_RS10990 (AB0962_10975)	xcpW	2250911..2251612 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AB0962_RS10995 (AB0962_10980)	xcpV	2251612..2251992 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
AB0962_RS11000 (AB0962_10985)	-	2251982..2252536 (-)	555	WP_005128793.1	type II secretion system protein	-
AB0962_RS11005 (AB0962_10990)	-	2252546..2253154 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AB0962_RS11010 (AB0962_10995)	-	2253192..2253965 (-)	774	WP_000497295.1	TatD family hydrolase	-
AB0962_RS11015 (AB0962_11000)	-	2253983..2254324 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
AB0962_RS11020 (AB0962_11005)	-	2254336..2255316 (-)	981	WP_001075409.1	DNA polymerase III subunit delta'	-
AB0962_RS11025 (AB0962_11010)	kdsB	2255328..2256089 (-)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1018242 AB0962_RS10990 WP_000594589.1 2250911..2251612(-) (xcpW) [Acinetobacter baumannii strain AB37-AUFP]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1018242 AB0962_RS10990 WP_000594589.1 2250911..2251612(-) (xcpW) [Acinetobacter baumannii strain AB37-AUFP]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996