Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | AB0T70_RS09925 | Genome accession | NZ_CP160032 |
| Coordinates | 2088840..2089220 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain AB44-AUFP | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2083840..2094220
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB0T70_RS09895 (AB0T70_09895) | tadA | 2083959..2084462 (-) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
| AB0T70_RS09900 (AB0T70_09900) | - | 2084469..2085593 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| AB0T70_RS09905 (AB0T70_09905) | ung | 2085590..2086303 (-) | 714 | WP_001177530.1 | uracil-DNA glycosylase | - |
| AB0T70_RS09910 (AB0T70_09910) | - | 2086354..2086950 (-) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| AB0T70_RS09915 (AB0T70_09915) | gspK | 2087180..2088139 (-) | 960 | WP_000301460.1 | type II secretion system minor pseudopilin GspK | - |
| AB0T70_RS09920 (AB0T70_09920) | xcpW | 2088139..2088840 (-) | 702 | WP_000594572.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| AB0T70_RS09925 (AB0T70_09925) | xcpV | 2088840..2089220 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| AB0T70_RS09930 (AB0T70_09930) | - | 2089210..2089764 (-) | 555 | WP_000841372.1 | type II secretion system protein | - |
| AB0T70_RS09935 (AB0T70_09935) | - | 2089774..2090382 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| AB0T70_RS09940 (AB0T70_09940) | - | 2090420..2091193 (-) | 774 | WP_000497301.1 | TatD family hydrolase | - |
| AB0T70_RS09945 (AB0T70_09945) | - | 2091211..2091552 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| AB0T70_RS09950 (AB0T70_09950) | - | 2091564..2092544 (-) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| AB0T70_RS09955 (AB0T70_09955) | kdsB | 2092556..2093317 (-) | 762 | WP_000680696.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1017193 AB0T70_RS09925 WP_000836911.1 2088840..2089220(-) (xcpV) [Acinetobacter baumannii strain AB44-AUFP]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1017193 AB0T70_RS09925 WP_000836911.1 2088840..2089220(-) (xcpV) [Acinetobacter baumannii strain AB44-AUFP]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |