Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | AB0T70_RS01550 | Genome accession | NZ_CP160032 |
| Coordinates | 335061..335534 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214065.1 | Uniprot ID | N9K1Q3 |
| Organism | Acinetobacter baumannii strain AB44-AUFP | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 330061..340534
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB0T70_RS01525 (AB0T70_01525) | - | 330524..332629 (-) | 2106 | WP_001117590.1 | HD domain-containing protein | - |
| AB0T70_RS01530 (AB0T70_01530) | - | 332669..332799 (-) | 131 | Protein_292 | hypothetical protein | - |
| AB0T70_RS01535 (AB0T70_01535) | rpoZ | 332838..333116 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| AB0T70_RS01540 (AB0T70_01540) | gmk | 333189..333818 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| AB0T70_RS01545 (AB0T70_01545) | ispH | 333941..334891 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| AB0T70_RS01550 (AB0T70_01550) | fimU | 335061..335534 (+) | 474 | WP_001214065.1 | GspH/FimT family pseudopilin | Machinery gene |
| AB0T70_RS01555 (AB0T70_01555) | pilV | 335528..336088 (+) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| AB0T70_RS01560 (AB0T70_01560) | pilW | 336089..337090 (+) | 1002 | WP_000079197.1 | PilW family protein | Machinery gene |
| AB0T70_RS01565 (AB0T70_01565) | pilX | 337087..337905 (+) | 819 | WP_002068685.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16837.43 Da Isoelectric Point: 8.5355
>NTDB_id=1017177 AB0T70_RS01550 WP_001214065.1 335061..335534(+) (fimU) [Acinetobacter baumannii strain AB44-AUFP]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=1017177 AB0T70_RS01550 WP_001214065.1 335061..335534(+) (fimU) [Acinetobacter baumannii strain AB44-AUFP]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCATT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGCCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAATGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCATT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGCCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAATGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |