Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AB0R62_RS11385 | Genome accession | NZ_CP160002 |
| Coordinates | 2222839..2223234 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain Newman D2C HOM | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2217839..2228234
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB0R62_RS11360 (AB0R62_11360) | thiE | 2218439..2219080 (-) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
| AB0R62_RS11365 (AB0R62_11365) | thiM | 2219082..2219873 (-) | 792 | WP_001108479.1 | hydroxyethylthiazole kinase | - |
| AB0R62_RS11370 (AB0R62_11370) | thiD | 2219857..2220687 (-) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AB0R62_RS11375 (AB0R62_11375) | tenA | 2220680..2221369 (-) | 690 | WP_000396077.1 | thiaminase II | - |
| AB0R62_RS11380 (AB0R62_11380) | sceD | 2221755..2222450 (-) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| AB0R62_RS11385 (AB0R62_11385) | ssb | 2222839..2223234 (-) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| AB0R62_RS11390 (AB0R62_11390) | - | 2223428..2223868 (+) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| AB0R62_RS11395 (AB0R62_11395) | fabZ | 2223927..2224367 (-) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| AB0R62_RS11400 (AB0R62_11400) | murA | 2224401..2225666 (-) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| AB0R62_RS11405 (AB0R62_11405) | - | 2225777..2226010 (-) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| AB0R62_RS11410 (AB0R62_11410) | - | 2226142..2226234 (-) | 93 | WP_001790611.1 | hypothetical protein | - |
| AB0R62_RS11415 (AB0R62_11415) | - | 2226572..2226976 (-) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=1017036 AB0R62_RS11385 WP_000932694.1 2222839..2223234(-) (ssb) [Staphylococcus aureus strain Newman D2C HOM]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1017036 AB0R62_RS11385 WP_000932694.1 2222839..2223234(-) (ssb) [Staphylococcus aureus strain Newman D2C HOM]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |