Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   ABXV02_RS02860 Genome accession   NZ_CP159912
Coordinates   528986..529105 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain PY79     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 523986..534105
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABXV02_RS02840 pbpG 524342..526417 (-) 2076 WP_003227540.1 transglycosylase domain-containing protein -
  ABXV02_RS02845 speE 526619..527449 (+) 831 WP_003227543.1 spermidine synthase -
  ABXV02_RS02850 speB 527510..528382 (+) 873 WP_003227545.1 agmatinase -
  ABXV02_RS02855 ywhH 528414..528887 (-) 474 WP_003227547.1 YbaK/EbsC family protein -
  ABXV02_RS02860 phrF 528986..529105 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  ABXV02_RS02865 rapF 529089..530234 (-) 1146 WP_003227549.1 response regulator aspartate phosphatase RapF Regulator
  ABXV02_RS02870 - 530237..530467 (+) 231 WP_009968328.1 hypothetical protein -
  ABXV02_RS02875 ywhK 530464..531819 (+) 1356 WP_003227552.1 YncE family protein -
  ABXV02_RS02880 ywhL 531858..533234 (+) 1377 WP_003244415.1 YncE family protein -
  ABXV02_RS02885 albG 533240..533941 (-) 702 WP_003243391.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=1016711 ABXV02_RS02860 WP_009968329.1 528986..529105(-) (phrF) [Bacillus subtilis strain PY79]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=1016711 ABXV02_RS02860 WP_009968329.1 528986..529105(-) (phrF) [Bacillus subtilis strain PY79]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment