Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | ABXU53_RS23905 | Genome accession | NZ_CP159886 |
| Coordinates | 5105848..5106372 (+) | Length | 174 a.a. |
| NCBI ID | WP_003116261.1 | Uniprot ID | Q7WZP2 |
| Organism | Pseudomonas aeruginosa strain P118 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5100848..5111372
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABXU53_RS23885 | pilR | 5102110..5103447 (+) | 1338 | WP_354689540.1 | two-component system response regulator PilR | Regulator |
| ABXU53_RS23890 | thiO | 5103493..5104587 (-) | 1095 | WP_023103512.1 | glycine oxidase ThiO | - |
| ABXU53_RS23895 | - | 5104727..5105227 (+) | 501 | WP_003116259.1 | GspH/FimT family pseudopilin | - |
| ABXU53_RS23900 | - | 5105350..5105838 (+) | 489 | WP_003141552.1 | GspH/FimT family pseudopilin | - |
| ABXU53_RS23905 | pilV | 5105848..5106372 (+) | 525 | WP_003116261.1 | type IV pilus modification protein PilV | Machinery gene |
| ABXU53_RS23910 | - | 5106381..5107196 (+) | 816 | WP_003116262.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| ABXU53_RS23915 | - | 5107193..5107798 (+) | 606 | WP_003116263.1 | pilus assembly protein | - |
| ABXU53_RS23920 | - | 5107812..5111288 (+) | 3477 | WP_003116264.1 | PilC/PilY family type IV pilus protein | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 18763.51 Da Isoelectric Point: 4.9113
>NTDB_id=1016570 ABXU53_RS23905 WP_003116261.1 5105848..5106372(+) (pilV) [Pseudomonas aeruginosa strain P118]
MSRETGFSMIEVLVALVLISIGVLGMVAMQGRTIQYTQESVQRNAAAMLASDLMEIMRADPDAVLNLRAQLREDSVYYKA
KGSDFPAAPARCAPLPADAKERLGCWAQQASKDLPGASALLNSQFYICRSPTPGTCDNTKGSAIEIQVAWRAMDGACFNA
SDSTLCTYSVRSEL
MSRETGFSMIEVLVALVLISIGVLGMVAMQGRTIQYTQESVQRNAAAMLASDLMEIMRADPDAVLNLRAQLREDSVYYKA
KGSDFPAAPARCAPLPADAKERLGCWAQQASKDLPGASALLNSQFYICRSPTPGTCDNTKGSAIEIQVAWRAMDGACFNA
SDSTLCTYSVRSEL
Nucleotide
Download Length: 525 bp
>NTDB_id=1016570 ABXU53_RS23905 WP_003116261.1 5105848..5106372(+) (pilV) [Pseudomonas aeruginosa strain P118]
ATGTCTCGAGAAACGGGTTTCAGCATGATCGAAGTACTGGTTGCTCTGGTGCTGATCAGCATTGGCGTACTGGGCATGGT
TGCCATGCAAGGGCGCACGATCCAGTACACGCAGGAGTCGGTACAACGCAATGCCGCAGCAATGCTTGCTAGCGACCTGA
TGGAAATAATGCGTGCGGACCCAGATGCCGTACTCAATCTACGCGCCCAACTACGCGAAGACTCGGTCTACTACAAGGCC
AAGGGCAGCGACTTTCCCGCAGCCCCAGCGCGCTGCGCGCCATTGCCAGCAGATGCTAAGGAACGTCTCGGCTGCTGGGC
CCAACAGGCCTCGAAAGACTTGCCGGGAGCCTCCGCACTCTTGAATAGCCAATTCTACATTTGTCGCAGCCCAACCCCGG
GTACCTGCGACAACACCAAAGGCTCGGCCATCGAAATCCAGGTTGCCTGGCGAGCCATGGATGGAGCGTGTTTCAACGCC
TCTGACTCCACCTTGTGCACCTACAGCGTCCGCTCCGAATTGTGA
ATGTCTCGAGAAACGGGTTTCAGCATGATCGAAGTACTGGTTGCTCTGGTGCTGATCAGCATTGGCGTACTGGGCATGGT
TGCCATGCAAGGGCGCACGATCCAGTACACGCAGGAGTCGGTACAACGCAATGCCGCAGCAATGCTTGCTAGCGACCTGA
TGGAAATAATGCGTGCGGACCCAGATGCCGTACTCAATCTACGCGCCCAACTACGCGAAGACTCGGTCTACTACAAGGCC
AAGGGCAGCGACTTTCCCGCAGCCCCAGCGCGCTGCGCGCCATTGCCAGCAGATGCTAAGGAACGTCTCGGCTGCTGGGC
CCAACAGGCCTCGAAAGACTTGCCGGGAGCCTCCGCACTCTTGAATAGCCAATTCTACATTTGTCGCAGCCCAACCCCGG
GTACCTGCGACAACACCAAAGGCTCGGCCATCGAAATCCAGGTTGCCTGGCGAGCCATGGATGGAGCGTGTTTCAACGCC
TCTGACTCCACCTTGTGCACCTACAGCGTCCGCTCCGAATTGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
59.429 |
100 |
0.598 |