Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABXU53_RS02070 Genome accession   NZ_CP159886
Coordinates   444397..444804 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain P118     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 439397..449804
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABXU53_RS02040 - 439445..440449 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  ABXU53_RS02045 pyrR 440473..440985 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ABXU53_RS02050 ruvX 441097..441531 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  ABXU53_RS02055 - 441531..442100 (-) 570 WP_003100947.1 YqgE/AlgH family protein -
  ABXU53_RS02060 - 442149..443042 (-) 894 WP_003162015.1 energy transducer TonB -
  ABXU53_RS02065 gshB 443189..444142 (-) 954 WP_003100943.1 glutathione synthase -
  ABXU53_RS02070 pilG 444397..444804 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  ABXU53_RS02075 pilH 444851..445216 (+) 366 WP_003084587.1 twitching motility response regulator PilH -
  ABXU53_RS02080 - 445267..445803 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  ABXU53_RS02085 pilJ 445888..447936 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  ABXU53_RS02090 pilK 447997..448872 (+) 876 WP_003084594.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=1016547 ABXU53_RS02070 WP_003084583.1 444397..444804(+) (pilG) [Pseudomonas aeruginosa strain P118]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=1016547 ABXU53_RS02070 WP_003084583.1 444397..444804(+) (pilG) [Pseudomonas aeruginosa strain P118]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385

Multiple sequence alignment