Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   ABYM97_RS02850 Genome accession   NZ_CP159874
Coordinates   528777..528896 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain PY79     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 523777..533896
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABYM97_RS02830 (ABYM97_02830) pbpG 524133..526208 (-) 2076 WP_003227540.1 transglycosylase domain-containing protein -
  ABYM97_RS02835 (ABYM97_02835) speE 526410..527240 (+) 831 WP_003227543.1 spermidine synthase -
  ABYM97_RS02840 (ABYM97_02840) speB 527301..528173 (+) 873 WP_003227545.1 agmatinase -
  ABYM97_RS02845 (ABYM97_02845) ywhH 528205..528678 (-) 474 WP_003227547.1 YbaK/EbsC family protein -
  ABYM97_RS02850 (ABYM97_02850) phrF 528777..528896 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  ABYM97_RS02855 (ABYM97_02855) rapF 528880..530025 (-) 1146 WP_003227549.1 response regulator aspartate phosphatase RapF Regulator
  ABYM97_RS02860 (ABYM97_02860) - 530028..530258 (+) 231 WP_009968328.1 hypothetical protein -
  ABYM97_RS02865 (ABYM97_02865) ywhK 530255..531610 (+) 1356 WP_003227552.1 YncE family protein -
  ABYM97_RS02870 (ABYM97_02870) ywhL 531649..533025 (+) 1377 WP_003244415.1 YncE family protein -
  ABYM97_RS02875 (ABYM97_02875) albG 533031..533732 (-) 702 WP_003243391.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=1016334 ABYM97_RS02850 WP_009968329.1 528777..528896(-) (phrF) [Bacillus subtilis strain PY79]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=1016334 ABYM97_RS02850 WP_009968329.1 528777..528896(-) (phrF) [Bacillus subtilis strain PY79]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment