Detailed information NTG1016291

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: ABNX04_RS12445
• Genome accession: NZ_CP159868
• Coordinates: 2608650..2611001 (-)
• Length: 783 a.a.
• NCBI ID: WP_038459264.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain JLU-1
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2603650..2616001

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABNX04_RS12410 (ABNX04_12410)	-	2604016..2604354 (-)	339	WP_038459259.1	YqxA family protein	-
ABNX04_RS12415 (ABNX04_12415)	-	2604371..2605564 (-)	1194	WP_007612673.1	stage II sporulation protein P	-
ABNX04_RS12420 (ABNX04_12420)	gpr	2605632..2606738 (-)	1107	WP_038459261.1	GPR endopeptidase	-
ABNX04_RS12425 (ABNX04_12425)	rpsT	2606941..2607207 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
ABNX04_RS12430 (ABNX04_12430)	holA	2607224..2608265 (-)	1042	Protein_2401	DNA polymerase III subunit delta	-
ABNX04_RS12435 (ABNX04_12435)	-	2608305..2608456 (-)	152	Protein_2402	hypothetical protein	-
ABNX04_RS12440 (ABNX04_12440)	-	2608497..2608631 (+)	135	WP_003152870.1	YqzM family protein	-
ABNX04_RS12445 (ABNX04_12445)	comEC	2608650..2611001 (-)	2352	WP_038459264.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ABNX04_RS12450 (ABNX04_12450)	-	2611002..2611571 (-)	570	WP_038459266.1	ComE operon protein 2	-
ABNX04_RS12455 (ABNX04_12455)	comEA	2611638..2612252 (-)	615	WP_038459268.1	helix-hairpin-helix domain-containing protein	Machinery gene
ABNX04_RS12460 (ABNX04_12460)	comER	2612311..2613132 (+)	822	WP_012118027.1	late competence protein ComER	-
ABNX04_RS12465 (ABNX04_12465)	-	2613201..2613938 (-)	738	WP_038459270.1	class I SAM-dependent methyltransferase	-
ABNX04_RS12470 (ABNX04_12470)	rsfS	2613935..2614291 (-)	357	WP_007408260.1	ribosome silencing factor	-
ABNX04_RS12475 (ABNX04_12475)	yqeK	2614295..2614870 (-)	576	WP_032873949.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
ABNX04_RS12480 (ABNX04_12480)	-	2614860..2615429 (-)	570	WP_007408258.1	nicotinate-nucleotide adenylyltransferase	-
ABNX04_RS12485 (ABNX04_12485)	yhbY	2615440..2615730 (-)	291	WP_007408257.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 783 a.a.
• Molecular weight: 86584.42 Da
• Isoelectric Point: 9.0950

>NTDB_id=1016291 ABNX04_RS12445 WP_038459264.1 2608650..2611001(-) (comEC) [Bacillus velezensis strain JLU-1]
MKYKYLLLPLAAVSATAGIAAAHVSWVLLLFLLYLLFIIVKTKQYAPVIVCLVSFCVYFFLYTVCDAANVTRYQAGSYTE
QAVITNIPKVDGAKISAVIRTHDKEKWAASYKIRSLEEKRLIEQLEPGMRCTFTGSLEQPAHATVPGGFDYKEYLYSQQI
HWLFSVTSIQQCEKSKQPLFKLLNIRKNLISIIRNHVPESSAGIVEALTLGERFSIEDDILSAYQNLGVVHLMAISGMHV
GLITAGLFYALIRIGLTREKAGILLLLFLPVYTLLSGAAPSVLRASLMLGFYIAGTLVKRGIHSSAALSLSYLLLLLFNP
YFLWQAGFQLSFAVSASLILSSSILKKAGKSRLAGLAMASFIAELSSLPFLLYHFQQISLVSFPMNMVMVPFYTLFVIPV
SVIGFLLLLLSRQMGECLFDMFDLVMKPVHDFITYAASVDLFTMIVSKPDFVSLLLLAVSVFTLFAALEKGGFLKLRKSA
LFFCAVLAYLICRPYFSPWGEADMLDIGQGDSLFISAPHRKGTVMVDTGGVIAYPGESWKEKRHPYSIGEKVLIPFLNGK
GVKKLDALILTHADQDHIGEAGVLIKNHRVKRLIVPVGFVKEPKDQNILNMAKENNIPVAEAKRGDTITAGDLQFQVLSP
ESSDGRSKNDSSLVLWTVLGGVSWLLTGDLESDGETEVLKTYPKLKADILKAGHHGSKSSTGEAFLKQLQPEAALISAGK
ENRYHHPHEEVLDRLKAYSVNVLRTDVSGTIQYRFKKGAGTFSVFPPYDIEETRAQEVKKTAD

Nucleotide

• Length: 2352 bp

>NTDB_id=1016291 ABNX04_RS12445 WP_038459264.1 2608650..2611001(-) (comEC) [Bacillus velezensis strain JLU-1]
ATGAAATATAAATACCTTCTTCTGCCTCTGGCGGCGGTTTCTGCAACTGCGGGAATTGCCGCCGCTCATGTCTCCTGGGT
TCTGCTCCTTTTTCTTCTGTATCTTCTCTTTATTATTGTAAAAACAAAGCAGTATGCTCCGGTTATCGTCTGCCTCGTTT
CTTTTTGTGTTTATTTCTTTCTTTATACGGTTTGTGACGCTGCGAATGTAACGCGGTATCAGGCCGGCAGTTATACTGAA
CAGGCCGTCATCACTAATATTCCGAAAGTTGACGGAGCGAAAATATCAGCTGTTATCCGTACACATGACAAGGAAAAATG
GGCGGCTTCGTACAAAATCCGGTCACTTGAGGAAAAGAGACTTATTGAACAGCTCGAACCGGGGATGCGCTGCACGTTTA
CAGGCTCTCTGGAACAGCCTGCACATGCGACGGTTCCCGGAGGTTTTGATTATAAGGAATATCTTTACTCTCAGCAGATT
CACTGGTTATTTTCCGTGACGTCCATTCAGCAGTGTGAAAAATCCAAACAGCCGCTGTTTAAACTGCTGAACATCAGAAA
AAATTTGATTTCGATCATTCGGAATCACGTGCCTGAATCTTCCGCCGGAATTGTTGAAGCGCTGACCTTAGGTGAAAGAT
TTTCTATAGAGGACGATATACTGAGTGCATATCAAAATTTAGGAGTCGTTCATTTAATGGCGATTTCCGGAATGCATGTC
GGTCTTATTACGGCGGGATTATTTTATGCTCTGATCAGAATCGGGCTGACAAGAGAAAAAGCGGGAATTTTGCTGCTGCT
GTTTTTGCCGGTGTATACGCTGCTGAGCGGTGCCGCCCCATCCGTATTGCGCGCATCCCTCATGCTGGGATTTTATATCG
CCGGAACTCTTGTTAAACGCGGCATTCATTCCTCTGCTGCATTGTCCCTGTCTTATCTGCTGCTCCTGCTGTTTAATCCT
TACTTCCTTTGGCAGGCGGGCTTCCAGCTTTCCTTTGCGGTAAGCGCCTCTTTAATTCTGTCATCCTCCATTTTAAAGAA
AGCGGGGAAAAGCAGACTTGCCGGGCTTGCGATGGCTTCATTCATTGCGGAGCTCAGCTCACTTCCGTTTCTTCTCTATC
ATTTTCAGCAGATTTCACTTGTCAGTTTTCCGATGAATATGGTGATGGTGCCATTTTATACGTTATTTGTCATTCCGGTT
TCTGTCATCGGTTTCCTTCTTCTTTTACTTTCAAGGCAGATGGGAGAATGTTTGTTTGATATGTTCGACCTTGTGATGAA
GCCTGTGCATGATTTCATTACATATGCGGCATCCGTTGATTTATTTACTATGATTGTGTCAAAGCCTGACTTTGTTTCCC
TTCTTCTGCTTGCGGTTTCCGTTTTTACGCTTTTTGCGGCTTTGGAAAAGGGAGGTTTTTTAAAACTCAGGAAATCGGCT
CTTTTTTTCTGCGCGGTTTTGGCTTATTTAATATGCCGTCCGTATTTCAGTCCATGGGGAGAAGCGGATATGCTTGATAT
CGGGCAGGGAGACTCACTGTTTATAAGCGCGCCGCACCGCAAAGGGACTGTAATGGTTGATACAGGGGGAGTGATTGCTT
ATCCCGGAGAATCATGGAAAGAAAAACGCCACCCGTATTCTATCGGCGAGAAGGTTTTGATTCCGTTTTTAAACGGAAAA
GGGGTGAAAAAGCTGGATGCGCTGATTTTAACCCATGCGGATCAAGATCACATCGGAGAAGCCGGAGTGTTAATCAAAAA
TCATAGAGTCAAACGGTTAATTGTCCCCGTGGGATTCGTAAAAGAACCGAAAGATCAGAACATATTAAATATGGCGAAAG
AAAACAACATTCCCGTTGCCGAAGCAAAGCGGGGCGACACCATTACAGCCGGTGATCTTCAGTTTCAGGTGCTGTCTCCG
GAGTCGTCTGACGGAAGGAGTAAAAATGATTCGTCACTGGTGCTTTGGACGGTTTTAGGCGGAGTGAGCTGGCTTTTGAC
GGGAGATTTAGAATCGGACGGCGAAACGGAAGTGCTGAAAACGTATCCGAAACTGAAGGCTGATATATTGAAGGCGGGTC
ATCACGGCAGCAAAAGCTCTACGGGTGAAGCCTTTTTGAAACAGCTTCAGCCGGAAGCAGCGCTGATTTCAGCAGGAAAA
GAGAATCGATACCATCATCCGCATGAAGAAGTGCTGGATCGTTTGAAGGCGTACTCTGTCAATGTGCTTCGCACCGATGT
CAGCGGAACGATTCAATACAGATTTAAAAAAGGCGCCGGAACGTTTTCCGTCTTCCCTCCATATGATATAGAAGAAACCA
GGGCGCAAGAAGTAAAAAAGACTGCCGATTGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (26-171)

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

• Competence protein (Competence) (208-469)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	56.865	98.595	0.561