Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABRY27_RS10010 Genome accession   NZ_CP159841
Coordinates   2046890..2047297 (-) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain PA3117     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2041890..2052297
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABRY27_RS09990 (ABRY27_09990) pilK 2042822..2043697 (-) 876 WP_031757002.1 type 4 fimbrial methyltransferase PilK -
  ABRY27_RS09995 (ABRY27_09995) pilJ 2043758..2045806 (-) 2049 WP_003100940.1 chemotaxis chemoreceptor PilJ -
  ABRY27_RS10000 (ABRY27_10000) - 2045891..2046427 (-) 537 WP_003084590.1 chemotaxis protein CheW -
  ABRY27_RS10005 (ABRY27_10005) pilH 2046478..2046843 (-) 366 WP_003084587.1 twitching motility response regulator PilH -
  ABRY27_RS10010 (ABRY27_10010) pilG 2046890..2047297 (-) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  ABRY27_RS10015 (ABRY27_10015) gshB 2047552..2048505 (+) 954 WP_003100943.1 glutathione synthase -
  ABRY27_RS10020 (ABRY27_10020) - 2048652..2049545 (+) 894 WP_003162015.1 energy transducer TonB -
  ABRY27_RS10025 (ABRY27_10025) - 2049594..2050163 (+) 570 WP_003084577.1 YqgE/AlgH family protein -
  ABRY27_RS10030 (ABRY27_10030) ruvX 2050163..2050597 (+) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  ABRY27_RS10035 (ABRY27_10035) pyrR 2050709..2051221 (+) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ABRY27_RS10040 (ABRY27_10040) - 2051245..2052249 (+) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=1016166 ABRY27_RS10010 WP_003084583.1 2046890..2047297(-) (pilG) [Pseudomonas aeruginosa strain PA3117]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=1016166 ABRY27_RS10010 WP_003084583.1 2046890..2047297(-) (pilG) [Pseudomonas aeruginosa strain PA3117]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385

Multiple sequence alignment