Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ABXJ25_RS01005 | Genome accession | NZ_CP159724 |
| Coordinates | 77643..78209 (+) | Length | 188 a.a. |
| NCBI ID | WP_002364599.1 | Uniprot ID | A0A1B4XKB5 |
| Organism | Enterococcus faecalis strain Z81-1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 72643..83209
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABXJ25_RS00995 (ABXJ25_01000) | gyrA | 74620..77121 (+) | 2502 | WP_002361457.1 | DNA gyrase subunit A | - |
| ABXJ25_RS01000 (ABXJ25_01005) | rpsF | 77296..77598 (+) | 303 | WP_002356019.1 | 30S ribosomal protein S6 | - |
| ABXJ25_RS01005 (ABXJ25_01010) | ssb | 77643..78209 (+) | 567 | WP_002364599.1 | single-stranded DNA-binding protein | Machinery gene |
| ABXJ25_RS01010 (ABXJ25_01015) | rpsR | 78235..78474 (+) | 240 | WP_002356021.1 | 30S ribosomal protein S18 | - |
| ABXJ25_RS01015 (ABXJ25_01020) | - | 78631..80655 (+) | 2025 | WP_002370595.1 | DHH family phosphoesterase | - |
| ABXJ25_RS01020 (ABXJ25_01025) | rplI | 80661..81113 (+) | 453 | WP_002356023.1 | 50S ribosomal protein L9 | - |
| ABXJ25_RS01025 (ABXJ25_01030) | dnaB | 81387..82754 (+) | 1368 | WP_002381331.1 | replicative DNA helicase | - |
Sequence
Protein
Download Length: 188 a.a. Molecular weight: 20574.18 Da Isoelectric Point: 4.6010
>NTDB_id=1015534 ABXJ25_RS01005 WP_002364599.1 77643..78209(+) (ssb) [Enterococcus faecalis strain Z81-1]
MINNVVLVGRLTKDPDLRYTASGSAVATFTLAVNRNFTNQNGDREADFINCVIWRKPAETMANYARKGTLLGVVGRIQTR
NYENQQGQRVYVTEVVCENFQLLESRSASEQRGTGGGSFNNNENGYQSQNRSFGNNNAGSGFNNNNNSFNPSSSQSQNNN
GMPDFDKDSDPFGGSGSSIDISDDDLPF
MINNVVLVGRLTKDPDLRYTASGSAVATFTLAVNRNFTNQNGDREADFINCVIWRKPAETMANYARKGTLLGVVGRIQTR
NYENQQGQRVYVTEVVCENFQLLESRSASEQRGTGGGSFNNNENGYQSQNRSFGNNNAGSGFNNNNNSFNPSSSQSQNNN
GMPDFDKDSDPFGGSGSSIDISDDDLPF
Nucleotide
Download Length: 567 bp
>NTDB_id=1015534 ABXJ25_RS01005 WP_002364599.1 77643..78209(+) (ssb) [Enterococcus faecalis strain Z81-1]
ATGATTAATAACGTTGTATTAGTCGGAAGATTGACAAAAGATCCTGACTTACGTTACACCGCTAGTGGTTCAGCTGTTGC
GACCTTTACACTTGCTGTAAACCGTAACTTTACGAATCAAAATGGTGACCGTGAAGCAGACTTTATCAACTGTGTGATTT
GGCGTAAACCCGCAGAAACAATGGCTAATTATGCCCGTAAAGGTACATTATTAGGTGTTGTCGGAAGAATTCAAACTCGT
AACTACGAGAACCAACAAGGTCAACGTGTCTACGTAACTGAAGTGGTTTGTGAAAACTTCCAATTGTTAGAATCTCGTTC
TGCTTCAGAACAAAGAGGAACTGGCGGCGGTAGCTTTAATAACAACGAAAATGGTTATCAATCACAAAATCGTAGCTTTG
GTAATAACAATGCCGGTTCTGGATTTAATAACAACAACAATAGTTTCAATCCATCATCTTCTCAGTCGCAAAACAATAAC
GGTATGCCTGATTTCGATAAAGATTCTGATCCATTTGGTGGCTCAGGTTCATCTATCGACATTTCAGATGATGATTTACC
ATTCTAA
ATGATTAATAACGTTGTATTAGTCGGAAGATTGACAAAAGATCCTGACTTACGTTACACCGCTAGTGGTTCAGCTGTTGC
GACCTTTACACTTGCTGTAAACCGTAACTTTACGAATCAAAATGGTGACCGTGAAGCAGACTTTATCAACTGTGTGATTT
GGCGTAAACCCGCAGAAACAATGGCTAATTATGCCCGTAAAGGTACATTATTAGGTGTTGTCGGAAGAATTCAAACTCGT
AACTACGAGAACCAACAAGGTCAACGTGTCTACGTAACTGAAGTGGTTTGTGAAAACTTCCAATTGTTAGAATCTCGTTC
TGCTTCAGAACAAAGAGGAACTGGCGGCGGTAGCTTTAATAACAACGAAAATGGTTATCAATCACAAAATCGTAGCTTTG
GTAATAACAATGCCGGTTCTGGATTTAATAACAACAACAATAGTTTCAATCCATCATCTTCTCAGTCGCAAAACAATAAC
GGTATGCCTGATTTCGATAAAGATTCTGATCCATTTGGTGGCTCAGGTTCATCTATCGACATTTCAGATGATGATTTACC
ATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
60.638 |
100 |
0.606 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
52.85 |
100 |
0.543 |