Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ABXJ36_RS09510 | Genome accession | NZ_CP159631 |
| Coordinates | 1960502..1961068 (+) | Length | 188 a.a. |
| NCBI ID | WP_033626857.1 | Uniprot ID | - |
| Organism | Enterococcus faecalis strain Z217-1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1955502..1966068
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABXJ36_RS09500 (ABXJ36_09500) | gyrA | 1957479..1959980 (+) | 2502 | WP_002379833.1 | DNA gyrase subunit A | - |
| ABXJ36_RS09505 (ABXJ36_09505) | rpsF | 1960155..1960457 (+) | 303 | WP_354017684.1 | 30S ribosomal protein S6 | - |
| ABXJ36_RS09510 (ABXJ36_09510) | ssb | 1960502..1961068 (+) | 567 | WP_033626857.1 | single-stranded DNA-binding protein | Machinery gene |
| ABXJ36_RS09515 (ABXJ36_09515) | rpsR | 1961094..1961333 (+) | 240 | WP_002356021.1 | 30S ribosomal protein S18 | - |
| ABXJ36_RS09520 (ABXJ36_09520) | - | 1961490..1963514 (+) | 2025 | WP_002363542.1 | DHH family phosphoesterase | - |
| ABXJ36_RS09525 (ABXJ36_09525) | rplI | 1963520..1963972 (+) | 453 | WP_002356023.1 | 50S ribosomal protein L9 | - |
| ABXJ36_RS09530 (ABXJ36_09530) | dnaB | 1964245..1965612 (+) | 1368 | WP_002381331.1 | replicative DNA helicase | - |
Sequence
Protein
Download Length: 188 a.a. Molecular weight: 20623.25 Da Isoelectric Point: 4.6010
>NTDB_id=1015069 ABXJ36_RS09510 WP_033626857.1 1960502..1961068(+) (ssb) [Enterococcus faecalis strain Z217-1]
MINNVVLVGRLTKDPDLRYTASGSAVATFTLAVNRNFTNQNGDREADFINCVIWRKPAETMANYARKGTLLGVVGRIQTR
NYENQQGQRVYVTEVVCENFQLLESRSASEQRGTGGGSFNNNENGYQSQNRSFGNNYAGSGFNNNNNSFNPSSSQSQNNN
GMPDFDKDSDPFGGSGSSIDISDDDLPF
MINNVVLVGRLTKDPDLRYTASGSAVATFTLAVNRNFTNQNGDREADFINCVIWRKPAETMANYARKGTLLGVVGRIQTR
NYENQQGQRVYVTEVVCENFQLLESRSASEQRGTGGGSFNNNENGYQSQNRSFGNNYAGSGFNNNNNSFNPSSSQSQNNN
GMPDFDKDSDPFGGSGSSIDISDDDLPF
Nucleotide
Download Length: 567 bp
>NTDB_id=1015069 ABXJ36_RS09510 WP_033626857.1 1960502..1961068(+) (ssb) [Enterococcus faecalis strain Z217-1]
ATGATTAATAACGTTGTATTAGTCGGAAGATTGACAAAAGATCCTGACTTACGTTACACCGCTAGTGGTTCAGCTGTTGC
GACCTTTACACTTGCTGTAAACCGTAACTTTACGAATCAAAATGGTGATCGTGAAGCAGACTTTATCAACTGTGTGATTT
GGCGTAAACCCGCAGAAACAATGGCTAATTATGCCCGTAAAGGTACATTATTAGGTGTTGTCGGAAGAATTCAAACTCGT
AACTACGAGAACCAACAAGGTCAACGTGTCTACGTAACTGAAGTGGTTTGTGAAAACTTCCAATTGTTAGAATCTCGTTC
TGCTTCAGAACAAAGAGGAACTGGCGGCGGTAGCTTTAATAACAACGAAAATGGTTATCAATCACAAAATCGTAGCTTTG
GTAATAACTATGCCGGTTCTGGATTTAATAACAACAACAATAGTTTCAATCCATCATCTTCTCAGTCGCAAAACAATAAC
GGTATGCCTGATTTCGATAAAGATTCTGATCCATTTGGTGGCTCAGGTTCATCTATCGACATTTCAGATGATGATTTACC
ATTCTAA
ATGATTAATAACGTTGTATTAGTCGGAAGATTGACAAAAGATCCTGACTTACGTTACACCGCTAGTGGTTCAGCTGTTGC
GACCTTTACACTTGCTGTAAACCGTAACTTTACGAATCAAAATGGTGATCGTGAAGCAGACTTTATCAACTGTGTGATTT
GGCGTAAACCCGCAGAAACAATGGCTAATTATGCCCGTAAAGGTACATTATTAGGTGTTGTCGGAAGAATTCAAACTCGT
AACTACGAGAACCAACAAGGTCAACGTGTCTACGTAACTGAAGTGGTTTGTGAAAACTTCCAATTGTTAGAATCTCGTTC
TGCTTCAGAACAAAGAGGAACTGGCGGCGGTAGCTTTAATAACAACGAAAATGGTTATCAATCACAAAATCGTAGCTTTG
GTAATAACTATGCCGGTTCTGGATTTAATAACAACAACAATAGTTTCAATCCATCATCTTCTCAGTCGCAAAACAATAAC
GGTATGCCTGATTTCGATAAAGATTCTGATCCATTTGGTGGCTCAGGTTCATCTATCGACATTTCAGATGATGATTTACC
ATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.686 |
100 |
0.606 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
53.927 |
100 |
0.548 |