Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ABWW75_RS10140 | Genome accession | NZ_CP159624 |
| Coordinates | 2149093..2149473 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain NAB05B | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2144093..2154473
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABWW75_RS10110 (ABWW75_10110) | tadA | 2144211..2144714 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| ABWW75_RS10115 (ABWW75_10115) | - | 2144721..2145845 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ABWW75_RS10120 (ABWW75_10120) | ung | 2145842..2146555 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ABWW75_RS10125 (ABWW75_10125) | - | 2146606..2147202 (-) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| ABWW75_RS10130 (ABWW75_10130) | gspK | 2147433..2148392 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| ABWW75_RS10135 (ABWW75_10135) | xcpW | 2148392..2149093 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ABWW75_RS10140 (ABWW75_10140) | xcpV | 2149093..2149473 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ABWW75_RS10145 (ABWW75_10145) | - | 2149463..2150017 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ABWW75_RS10150 (ABWW75_10150) | - | 2150027..2150635 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ABWW75_RS10155 (ABWW75_10155) | - | 2150673..2151446 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ABWW75_RS10160 (ABWW75_10160) | - | 2151464..2151805 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ABWW75_RS10165 (ABWW75_10165) | - | 2151817..2152797 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| ABWW75_RS10170 (ABWW75_10170) | kdsB | 2152809..2153570 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1014825 ABWW75_RS10140 WP_000836911.1 2149093..2149473(-) (xcpV) [Acinetobacter baumannii strain NAB05B]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1014825 ABWW75_RS10140 WP_000836911.1 2149093..2149473(-) (xcpV) [Acinetobacter baumannii strain NAB05B]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |