Detailed information NTG1014824

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABWW75_RS10135
• Genome accession: NZ_CP159624
• Coordinates: 2148392..2149093 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain NAB05B
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2143392..2154093

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABWW75_RS10105 (ABWW75_10105)	-	2143698..2144141 (-)	444	WP_001246675.1	SRPBCC family protein	-
ABWW75_RS10110 (ABWW75_10110)	tadA	2144211..2144714 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ABWW75_RS10115 (ABWW75_10115)	-	2144721..2145845 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ABWW75_RS10120 (ABWW75_10120)	ung	2145842..2146555 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
ABWW75_RS10125 (ABWW75_10125)	-	2146606..2147202 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
ABWW75_RS10130 (ABWW75_10130)	gspK	2147433..2148392 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ABWW75_RS10135 (ABWW75_10135)	xcpW	2148392..2149093 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABWW75_RS10140 (ABWW75_10140)	xcpV	2149093..2149473 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABWW75_RS10145 (ABWW75_10145)	-	2149463..2150017 (-)	555	WP_000841373.1	type II secretion system protein	-
ABWW75_RS10150 (ABWW75_10150)	-	2150027..2150635 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ABWW75_RS10155 (ABWW75_10155)	-	2150673..2151446 (-)	774	WP_000497298.1	TatD family hydrolase	-
ABWW75_RS10160 (ABWW75_10160)	-	2151464..2151805 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
ABWW75_RS10165 (ABWW75_10165)	-	2151817..2152797 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ABWW75_RS10170 (ABWW75_10170)	kdsB	2152809..2153570 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1014824 ABWW75_RS10135 WP_000594589.1 2148392..2149093(-) (xcpW) [Acinetobacter baumannii strain NAB05B]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1014824 ABWW75_RS10135 WP_000594589.1 2148392..2149093(-) (xcpW) [Acinetobacter baumannii strain NAB05B]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996