Detailed information NTG1013747

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ABWH88_RS07550
• Genome accession: NZ_CP159479
• Coordinates: 1579737..1581125 (+)
• Length: 462 a.a.
• NCBI ID: WP_014576069.1
• Uniprot ID: -
• Organism: Marinobacter adhaerens strain ac5
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1574737..1586125

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABWH88_RS07535 (ABWH88_07535)	-	1575375..1576208 (+)	834	WP_041644956.1	outer membrane protein assembly factor BamD	-
ABWH88_RS07540 (ABWH88_07540)	-	1576261..1577931 (-)	1671	WP_041644955.1	NAD+ synthase	-
ABWH88_RS07545 (ABWH88_07545)	-	1578025..1579680 (+)	1656	WP_014576070.1	PAS domain-containing sensor histidine kinase	-
ABWH88_RS07550 (ABWH88_07550)	pilR	1579737..1581125 (+)	1389	WP_014576069.1	sigma-54 dependent transcriptional regulator	Regulator
ABWH88_RS07555 (ABWH88_07555)	-	1581221..1581778 (+)	558	WP_014576068.1	GspH/FimT family pseudopilin	-
ABWH88_RS07560 (ABWH88_07560)	-	1581785..1582192 (-)	408	WP_041644953.1	type IV pilin protein	-
ABWH88_RS07565 (ABWH88_07565)	-	1582214..1585711 (-)	3498	WP_014576066.1	pilus assembly protein	-

Sequence

Protein

• Length: 462 a.a.
• Molecular weight: 50814.99 Da
• Isoelectric Point: 4.9107

>NTDB_id=1013747 ABWH88_RS07550 WP_014576069.1 1579737..1581125(+) (pilR) [Marinobacter adhaerens strain ac5]
MTKYTALIVDDEPDIRELLEITLTRMGITTLTAPDLTSAQKLLEQNTTHLCLTDMNLPDGNGIELVQWIQKHSPATPVAV
ITAYGNMDTAIESLKAGAFDFVSKPVELPRLRELVNSALKLAEPKADAEDTADEPGLLLGKSPEIRKLRNQTRKLARSQA
PVFISGESGSGKELVARMIHLQGPRREGPFIAVNCGAIPSELMESEFFGHKKGSFTGAVENKDGLFRSANGGTLFLDEVA
DLPLAMQVKLLRAIQEKAVRPVGDTKEVPVDIRVLSATHKNLPELVQEGSFRQDLFYRINVIELSVPPLRERPDDISLLS
NHILERIAKEYECDPASLTPAAVDRLRSYDFPGNVRELENVLERAFTLCDADQIDADDLHLGNGVQHAASASQIIAEGQV
GDGEGIAVPDGEIDLEGYLEKIERQAIEKALEATRWNKTAAAKRLGISFRALRYRLKKLGME

Nucleotide

• Length: 1389 bp

>NTDB_id=1013747 ABWH88_RS07550 WP_014576069.1 1579737..1581125(+) (pilR) [Marinobacter adhaerens strain ac5]
ATGACCAAATACACAGCGCTGATCGTTGATGATGAACCGGACATCCGGGAGTTACTTGAGATCACCCTCACCCGGATGGG
CATAACAACCCTCACGGCACCCGACCTCACCAGCGCCCAGAAATTGCTGGAACAGAACACCACCCACCTCTGCCTGACCG
ACATGAACCTGCCAGACGGTAATGGCATTGAACTGGTCCAGTGGATTCAGAAACACTCTCCGGCCACGCCTGTTGCCGTG
ATCACAGCGTACGGCAACATGGACACCGCGATTGAATCGCTCAAAGCCGGGGCTTTTGATTTCGTGTCCAAACCGGTGGA
GCTGCCCCGACTAAGGGAACTGGTCAATAGCGCCCTCAAACTCGCTGAGCCCAAGGCAGACGCGGAAGATACAGCCGACG
AGCCAGGCCTGCTACTCGGCAAATCACCAGAGATTCGAAAACTCCGGAACCAGACCCGAAAACTGGCCCGAAGCCAGGCC
CCCGTGTTTATCAGTGGCGAATCTGGCAGTGGTAAAGAGCTGGTGGCCCGAATGATCCACCTCCAGGGGCCCCGCCGCGA
AGGACCGTTCATCGCGGTTAACTGCGGTGCGATTCCCTCGGAACTGATGGAAAGCGAATTCTTCGGCCACAAGAAAGGCA
GCTTTACCGGGGCCGTGGAGAACAAAGACGGCCTGTTCCGCTCTGCCAACGGAGGTACCCTATTCCTTGATGAAGTGGCA
GACCTGCCCCTGGCCATGCAGGTGAAACTGCTCCGCGCCATACAGGAAAAAGCCGTTCGGCCAGTCGGGGACACCAAGGA
AGTGCCCGTCGACATTCGGGTACTGAGCGCCACACACAAGAATCTGCCGGAGCTGGTCCAGGAAGGCAGCTTTCGTCAGG
ATCTTTTCTACCGGATTAACGTGATCGAACTCTCAGTGCCACCCCTGAGAGAGCGGCCAGATGATATTTCTCTGCTTTCG
AATCACATTCTTGAACGAATTGCGAAAGAGTATGAGTGTGACCCTGCCTCGTTAACGCCAGCGGCCGTGGACAGACTGCG
AAGCTATGACTTTCCGGGCAATGTCCGGGAACTGGAAAACGTCTTGGAGCGGGCTTTTACCCTGTGCGACGCTGACCAGA
TCGATGCTGATGATCTGCATCTGGGGAATGGTGTTCAGCATGCAGCTTCGGCCTCGCAGATCATTGCCGAGGGCCAGGTT
GGCGATGGGGAAGGAATTGCCGTGCCCGATGGGGAGATTGATCTGGAAGGGTATCTGGAAAAGATTGAACGACAGGCCAT
CGAGAAGGCTCTTGAAGCGACACGGTGGAACAAGACGGCGGCTGCGAAACGACTGGGTATTAGCTTTCGGGCGTTAAGAT
ATCGATTGAAGAAGTTGGGGATGGAGTAG

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-115)

• Sigma-54 interaction domain (Sigma54_activat) (138-304)

• Bacterial regulatory protein, Fis family (HTH_8) (419-459)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	63.931	100	0.641
pilR	Acinetobacter baumannii strain A118	53.696	99.567	0.535