Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   ABVR75_RS06855 Genome accession   NZ_CP159464
Coordinates   1328440..1329717 (-) Length   425 a.a.
NCBI ID   WP_353891333.1    Uniprot ID   -
Organism   Latilactobacillus sakei subsp. sakei strain CBA3649     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1323440..1334717
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABVR75_RS06850 (ABVR75_06850) - 1326705..1328414 (-) 1710 WP_353891332.1 proline--tRNA ligase -
  ABVR75_RS06855 (ABVR75_06855) eeP 1328440..1329717 (-) 1278 WP_353891333.1 RIP metalloprotease RseP Regulator
  ABVR75_RS06860 (ABVR75_06860) - 1329923..1330711 (-) 789 WP_016265347.1 phosphatidate cytidylyltransferase -
  ABVR75_RS06865 (ABVR75_06865) - 1330742..1331497 (-) 756 WP_061827029.1 isoprenyl transferase -
  ABVR75_RS06870 (ABVR75_06870) - 1331665..1334412 (+) 2748 WP_142501048.1 YhgE/Pip domain-containing protein -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 46693.39 Da        Isoelectric Point: 9.6558

>NTDB_id=1013605 ABVR75_RS06855 WP_353891333.1 1328440..1329717(-) (eeP) [Latilactobacillus sakei subsp. sakei strain CBA3649]
MAAIIAFIIIFGILVVVHEFGHFYMAKRSGILVREFSVGMGPKLFATRKNGTTYTIRWLPLGGYVRMAGMADDESEIEAG
TQATLILDEQGRVQQINTSDKVTTLNGVPFQIAKTDLQKELWVEGYEGGDESEMKRYPVLHDATIIEEDGTEVQIAPVDV
QFQSATLINRMLTNFAGPFNNFILAILAFILFAFLSGGVPQQSNQIGTVQKNSAAQKAGLKANDRLLKVDNKKVASFTEF
SAIISEHPNDTVAVRVQRGATEKTIKVTPKAVKVANQKEKVGQVGVTQKVKMDHSLKAKISYGFTQAWSIASQIFKILGS
FLTGGFSLDKLSGPVGMYSMTTQFTQQGFNALVYFLAFLSLNLGIMNLIPIPALDGGKLVLNIIEAIRRKPISPEKEGIV
TLIGVGIMVLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=1013605 ABVR75_RS06855 WP_353891333.1 1328440..1329717(-) (eeP) [Latilactobacillus sakei subsp. sakei strain CBA3649]
TTGGCTGCAATTATTGCGTTTATCATCATCTTTGGTATTTTAGTAGTCGTTCATGAATTTGGGCATTTTTACATGGCTAA
GCGCTCAGGCATTTTGGTGCGAGAGTTTTCTGTCGGCATGGGACCTAAATTATTTGCAACTCGCAAAAACGGCACAACTT
ACACCATCCGGTGGTTACCATTAGGTGGTTACGTTCGAATGGCGGGAATGGCCGACGATGAATCTGAAATTGAAGCTGGC
ACACAAGCGACTTTAATTTTGGACGAACAAGGACGCGTTCAACAGATTAATACAAGTGACAAGGTCACCACGTTAAACGG
GGTACCTTTCCAAATTGCTAAAACAGATTTACAAAAAGAATTGTGGGTCGAAGGTTACGAAGGCGGCGACGAGTCAGAAA
TGAAACGTTATCCCGTCTTACATGATGCGACGATTATCGAAGAAGACGGAACGGAAGTGCAAATCGCACCCGTGGATGTC
CAATTCCAATCAGCAACGTTGATTAATCGGATGTTAACGAACTTTGCCGGACCATTTAATAACTTCATCCTCGCAATTCT
AGCCTTTATCCTCTTCGCTTTTCTAAGCGGGGGTGTGCCGCAGCAATCCAATCAAATTGGCACGGTACAAAAGAATTCTG
CTGCTCAAAAGGCAGGCTTAAAAGCCAACGATCGTCTTTTGAAAGTTGATAACAAAAAAGTAGCGAGCTTCACTGAATTT
AGTGCGATAATTTCAGAACACCCTAACGACACCGTTGCGGTACGCGTTCAACGGGGCGCAACTGAAAAGACAATCAAGGT
GACACCAAAAGCTGTCAAAGTGGCTAACCAAAAAGAAAAGGTTGGTCAAGTGGGAGTCACACAAAAAGTCAAAATGGATC
ATAGCCTAAAGGCCAAGATTTCTTACGGCTTTACACAAGCTTGGTCAATTGCCAGTCAGATTTTCAAGATCCTCGGGTCA
TTTTTAACCGGTGGGTTCTCACTAGATAAATTATCGGGGCCGGTCGGCATGTATTCAATGACGACCCAATTTACCCAACA
AGGCTTTAATGCGTTAGTTTATTTCTTAGCGTTCTTATCACTTAATTTGGGGATTATGAATCTAATTCCGATTCCGGCGT
TAGATGGTGGTAAGTTAGTCTTGAACATTATTGAAGCGATTCGTCGCAAACCTATTTCACCTGAAAAAGAAGGCATCGTG
ACATTAATCGGTGTCGGTATTATGGTGTTATTAATGGTCTTAGTCACGTGGAATGATATACAACGATTTTTCTTTTAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-411)

PDZ domain (PDZ_6)

(206-258)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

48.611

100

0.494
  eeP Streptococcus thermophilus LMG 18311

48.611

100

0.494

Multiple sequence alignment