Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | ABVR75_RS02745 | Genome accession | NZ_CP159464 |
| Coordinates | 538339..538767 (+) | Length | 142 a.a. |
| NCBI ID | WP_154255254.1 | Uniprot ID | - |
| Organism | Latilactobacillus sakei subsp. sakei strain CBA3649 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 533339..543767
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABVR75_RS02730 (ABVR75_02730) | - | 534917..536005 (+) | 1089 | WP_035144637.1 | MraY family glycosyltransferase | - |
| ABVR75_RS02735 (ABVR75_02735) | - | 536032..536697 (-) | 666 | WP_025016329.1 | YigZ family protein | - |
| ABVR75_RS02740 (ABVR75_02740) | comFA | 536759..538096 (+) | 1338 | WP_052039239.1 | DEAD/DEAH box helicase | Machinery gene |
| ABVR75_RS02745 (ABVR75_02745) | comFC | 538339..538767 (+) | 429 | WP_154255254.1 | ComF family protein | Machinery gene |
| ABVR75_RS02750 (ABVR75_02750) | raiA | 538894..539439 (+) | 546 | WP_011374202.1 | ribosome-associated translation inhibitor RaiA | - |
| ABVR75_RS02755 (ABVR75_02755) | secA | 539688..542051 (+) | 2364 | WP_011374203.1 | preprotein translocase subunit SecA | - |
| ABVR75_RS02760 (ABVR75_02760) | prfB | 542121..543237 (+) | 1117 | WP_099049013.1 | peptide chain release factor 2 | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 16678.13 Da Isoelectric Point: 10.0721
>NTDB_id=1013593 ABVR75_RS02745 WP_154255254.1 538339..538767(+) (comFC) [Latilactobacillus sakei subsp. sakei strain CBA3649]
MQLYFQRYKGQGDYQLRLLFERDIRTRFPVKSNVTYVPIPSDEQHQQERGFNPVQGLFETCFPLTSLLKKRPTEKGQAQK
NRAERLASSQFFELIPQELPHKPQSIIILDDIYTTGRTVWHAQQCLRARYPQIAINAITLAR
MQLYFQRYKGQGDYQLRLLFERDIRTRFPVKSNVTYVPIPSDEQHQQERGFNPVQGLFETCFPLTSLLKKRPTEKGQAQK
NRAERLASSQFFELIPQELPHKPQSIIILDDIYTTGRTVWHAQQCLRARYPQIAINAITLAR
Nucleotide
Download Length: 429 bp
>NTDB_id=1013593 ABVR75_RS02745 WP_154255254.1 538339..538767(+) (comFC) [Latilactobacillus sakei subsp. sakei strain CBA3649]
ATGCAGTTATATTTTCAACGTTATAAGGGCCAAGGAGACTATCAATTACGGCTATTATTCGAACGCGACATTCGAACTCG
GTTTCCAGTAAAATCCAATGTAACTTACGTGCCTATTCCATCTGATGAGCAACATCAACAAGAACGGGGCTTTAATCCAG
TCCAAGGCTTATTCGAAACTTGTTTTCCGTTAACATCGCTATTGAAAAAGCGGCCAACAGAGAAGGGCCAAGCACAAAAA
AATCGTGCAGAACGTCTTGCAAGTTCACAATTTTTTGAATTAATACCGCAAGAATTACCGCATAAGCCACAATCGATAAT
AATCTTGGATGATATTTATACGACGGGCCGAACGGTGTGGCATGCACAACAATGTCTGCGTGCTCGGTATCCACAAATTG
CAATTAATGCGATTACTTTAGCCAGATAG
ATGCAGTTATATTTTCAACGTTATAAGGGCCAAGGAGACTATCAATTACGGCTATTATTCGAACGCGACATTCGAACTCG
GTTTCCAGTAAAATCCAATGTAACTTACGTGCCTATTCCATCTGATGAGCAACATCAACAAGAACGGGGCTTTAATCCAG
TCCAAGGCTTATTCGAAACTTGTTTTCCGTTAACATCGCTATTGAAAAAGCGGCCAACAGAGAAGGGCCAAGCACAAAAA
AATCGTGCAGAACGTCTTGCAAGTTCACAATTTTTTGAATTAATACCGCAAGAATTACCGCATAAGCCACAATCGATAAT
AATCTTGGATGATATTTATACGACGGGCCGAACGGTGTGGCATGCACAACAATGTCTGCGTGCTCGGTATCCACAAATTG
CAATTAATGCGATTACTTTAGCCAGATAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Latilactobacillus sakei subsp. sakei 23K |
95.775 |
100 |
0.958 |
| comFC | Lactococcus lactis subsp. cremoris KW2 |
38.028 |
100 |
0.38 |