Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   U1770_RS13215 Genome accession   NZ_CP159430
Coordinates   2645227..2645892 (-) Length   221 a.a.
NCBI ID   WP_196573306.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BSN40     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2640227..2650892
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U1770_RS13195 (U1770_13195) - 2640697..2640810 (-) 114 Protein_2559 hypothetical protein -
  U1770_RS13200 (U1770_13200) - 2641469..2643469 (-) 2001 WP_000776751.1 ABC transporter permease -
  U1770_RS13205 (U1770_13205) - 2643466..2644221 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  U1770_RS13210 (U1770_13210) braS 2644329..2645216 (-) 888 WP_000143425.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  U1770_RS13215 (U1770_13215) braR 2645227..2645892 (-) 666 WP_196573306.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  U1770_RS13220 (U1770_13220) - 2645918..2646118 (-) 201 WP_000604730.1 hypothetical protein -
  U1770_RS13225 (U1770_13225) - 2646316..2647740 (+) 1425 WP_000953755.1 alkaline phosphatase -
  U1770_RS13230 (U1770_13230) - 2647800..2647901 (-) 102 WP_000731976.1 SE2200 family small protein -
  U1770_RS13235 (U1770_13235) - 2648023..2648478 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  U1770_RS13240 (U1770_13240) - 2648723..2649484 (-) 762 WP_000323441.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25414.50 Da        Isoelectric Point: 4.9212

>NTDB_id=1013538 U1770_RS13215 WP_196573306.1 2645227..2645892(-) (braR) [Staphylococcus aureus strain BSN40]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILNEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=1013538 U1770_RS13215 WP_196573306.1 2645227..2645892(-) (braR) [Staphylococcus aureus strain BSN40]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAGCCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAAATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.548

100

0.995

Multiple sequence alignment