Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   ABVJ71_RS14760 Genome accession   NZ_CP159358
Coordinates   2877040..2877681 (+) Length   213 a.a.
NCBI ID   WP_353854688.1    Uniprot ID   -
Organism   Bacillus sp. Bos-x628     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2872040..2882681
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABVJ71_RS14735 - 2872360..2872647 (-) 288 WP_353854684.1 inner spore coat protein -
  ABVJ71_RS14740 degQ 2873219..2873359 (+) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  ABVJ71_RS14745 - 2873511..2874416 (+) 906 WP_353854685.1 polyprenyl synthetase family protein -
  ABVJ71_RS14750 comX 2874422..2874589 (+) 168 WP_353854686.1 competence pheromone ComX -
  ABVJ71_RS14755 comP 2874647..2876959 (+) 2313 WP_353854687.1 ATP-binding protein Regulator
  ABVJ71_RS14760 comA 2877040..2877681 (+) 642 WP_353854688.1 response regulator transcription factor Regulator
  ABVJ71_RS14765 - 2877705..2878094 (+) 390 WP_353854689.1 hotdog fold thioesterase -
  ABVJ71_RS14770 mnhG 2878124..2878498 (-) 375 WP_353856706.1 monovalent cation/H(+) antiporter subunit G -
  ABVJ71_RS14775 - 2878482..2878763 (-) 282 WP_353854690.1 Na(+)/H(+) antiporter subunit F1 -
  ABVJ71_RS14780 - 2878763..2879242 (-) 480 WP_353854691.1 Na+/H+ antiporter subunit E -
  ABVJ71_RS14785 - 2879248..2880729 (-) 1482 WP_353854692.1 Na+/H+ antiporter subunit D -
  ABVJ71_RS14790 - 2880722..2881063 (-) 342 WP_353854693.1 Na(+)/H(+) antiporter subunit C -
  ABVJ71_RS14795 - 2881063..2881494 (-) 432 WP_353854694.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 24205.56 Da        Isoelectric Point: 4.5799

>NTDB_id=1013403 ABVJ71_RS14760 WP_353854688.1 2877040..2877681(+) (comA) [Bacillus sp. Bos-x628]
MKKILVIDDHPAVMEGTKSILESDQHLSVDCLSPDAEAAFLKTHDFSIYDVILMDLNLGDINGMDIAKQILETNEQVKII
IYTGYEVDDYFEEAIRAGLHGAISKTETKDKIIEYIHRTLQGEVVIQLSYLRKLISQQQEKPEQAQQTDHDLLTERECLI
LREVEKGYTNQEIADVLHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSENVL

Nucleotide


Download         Length: 642 bp        

>NTDB_id=1013403 ABVJ71_RS14760 WP_353854688.1 2877040..2877681(+) (comA) [Bacillus sp. Bos-x628]
ATGAAGAAGATATTGGTCATTGATGATCATCCGGCTGTCATGGAAGGGACAAAAAGCATATTAGAATCAGATCAGCACCT
ATCAGTCGATTGTTTAAGTCCTGATGCAGAAGCCGCCTTTTTAAAAACGCATGATTTTTCCATCTATGATGTGATTTTGA
TGGATTTAAACCTCGGTGATATCAATGGAATGGACATTGCGAAACAAATTCTCGAAACAAATGAGCAAGTGAAAATTATC
ATTTATACAGGCTATGAAGTGGATGATTATTTTGAAGAGGCCATTCGAGCTGGATTGCACGGTGCAATTAGTAAAACAGA
GACAAAAGACAAGATTATTGAATACATACATCGTACATTGCAAGGAGAAGTTGTCATTCAGCTATCCTATTTAAGAAAAT
TAATCTCACAGCAACAAGAAAAACCAGAACAGGCGCAGCAGACAGATCATGATCTGTTAACAGAGCGGGAATGTTTGATT
CTTCGTGAAGTGGAAAAAGGCTACACCAACCAAGAAATTGCCGATGTGCTTCATTTGAGCAAACGCTCGATTGAATACAG
TTTGACATCCATCTTTAATAAGCTGAATGTTGGATCACGAACAGAAGCTGTGTTAATTGCAAAATCTGAAAATGTGCTGT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(152-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

71.495

100

0.718

Multiple sequence alignment