Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | ABVJ71_RS10810 | Genome accession | NZ_CP159358 |
| Coordinates | 2088318..2090753 (-) | Length | 811 a.a. |
| NCBI ID | WP_353854029.1 | Uniprot ID | - |
| Organism | Bacillus sp. Bos-x628 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2083318..2095753
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABVJ71_RS10785 | ispF | 2083325..2083801 (-) | 477 | WP_353854025.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| ABVJ71_RS10790 | ispD | 2083805..2084494 (-) | 690 | WP_353854026.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| ABVJ71_RS10795 | - | 2084508..2085608 (-) | 1101 | WP_353856638.1 | PIN/TRAM domain-containing protein | - |
| ABVJ71_RS10800 | disA | 2085764..2086843 (-) | 1080 | WP_353854027.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| ABVJ71_RS10805 | radA | 2086846..2088225 (-) | 1380 | WP_353854028.1 | DNA repair protein RadA | Machinery gene |
| ABVJ71_RS10810 | clpC | 2088318..2090753 (-) | 2436 | WP_353854029.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| ABVJ71_RS10815 | - | 2090750..2091841 (-) | 1092 | WP_353854030.1 | protein arginine kinase | - |
| ABVJ71_RS10820 | - | 2091846..2092403 (-) | 558 | WP_353854031.1 | UvrB/UvrC motif-containing protein | - |
| ABVJ71_RS10825 | - | 2092418..2092882 (-) | 465 | WP_353854032.1 | CtsR family transcriptional regulator | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90103.87 Da Isoelectric Point: 6.4364
>NTDB_id=1013386 ABVJ71_RS10810 WP_353854029.1 2088318..2090753(-) (clpC) [Bacillus sp. Bos-x628]
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSEKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGTSTAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKTWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIQKGQHVVIDVENG
EFVVKATAATN
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSEKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGTSTAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKTWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIQKGQHVVIDVENG
EFVVKATAATN
Nucleotide
Download Length: 2436 bp
>NTDB_id=1013386 ABVJ71_RS10810 WP_353854029.1 2088318..2090753(-) (clpC) [Bacillus sp. Bos-x628]
ATGATGTTTGGAAGATTCACGGAAAGAGCTCAAAAGGTATTAGCGCTTGCACAAGAAGAAGCTATTCGCTTAGGCCATAA
GAACATCGGAACAGAGCATATTTTACTTGGTCTTGTACGCGAAGGTGAGGGAATTGCCGCAAAAGCATTAGAAGCACTGG
GTCTTGTTTCAGAAAAAATCCAAAAAGAAGTTGAAAGCTTGATTGGGAGAGGACAAGAGGTATCTCAAGCTATTCCTCAT
TATACGCCAAGAGCAAAGAAGGTTACTGAGCTTTCAATGGATGAAGCGAGAAAGCTAGGCCATTCCTATGTGGGGACAGA
ACATATTCTTTTAGGGCTGATTCGTGAAGGCGAGGGTGTAGCTGCCCGCGTATTAAACAATCTCGGAGTGAGCTTAAATA
AAGCGCGTCAACAAGTATTACAGTTGCTTGGTAGCAATGAGACTGGTACCTCTACGGCAGGATCTAATAGCAATGCAAAT
ACGCCAACTTTGGATAGTTTGGCTAGAGATTTAACAGCTATTGCAAAAGAGGACAGTTTAGATCCTGTCATTGGCCGAAG
CAAAGAAATTCAACGTGTGATAGAGGTATTAAGTAGAAGAACGAAGAATAACCCTGTGCTAATCGGTGAACCAGGTGTTG
GTAAAACAGCCATCGCAGAAGGTCTTGCACAGCAAATTATCCACAATGAAGTACCAGAAATATTACGTGATAAACGAGTG
ATGACACTCGATATGGGAACCGTTGTAGCGGGAACGAAGTATCGCGGTGAATTCGAGGATCGTTTAAAAAAAGTCATGGA
TGAAATTCGTCAGGCTGGAAATATTATTCTCTTCATTGATGAACTTCATACATTGATAGGTGCTGGTGGAGCAGAAGGGG
CAATTGATGCTTCTAATATTTTAAAACCATCTTTAGCACGCGGTGAGCTTCAATGTATTGGGGCAACCACGTTAGATGAA
TATCGTAAATATATTGAAAAGGATGCTGCATTAGAACGCCGCTTCCAACCAATTCAAGTCGATCAGCCATCTGTCGATGA
GAGTATTCAAATTTTAAAAGGACTGAGAGATCGTTATGAAGCGCATCATCGTGTATCCATTACGGATGAAGCAATTGAAG
CTGCGGTGAAGTTATCTGATCGTTACATTTCTGATCGTTTCCTTCCTGATAAGGCGATTGATCTGATTGATGAGGCAGGT
TCGAAGGTGCGTTTACGTTCTTTCACCACACCGCCTAATTTAAAGGAACTAGAGCAAAAGCTGGATGAGGTTCGAAAAGA
AAAGGATGCAGCTGTTCAAAGTCAAGAATTTGAAAAAGCAGCTTCATTACGTGATACAGAGCAGCGTCTTCGTGAAAAAG
TAGAAGTGACTAAGAAAACGTGGAAAGAAAAGCAGGGTCAAGAGAATTCAGAGGTATCTGTAGATGATATTGCGATGGTT
GTGTCCAGTTGGACGGGAGTACCTGTTTCAAAAATTGCACAGACCGAAACAGATAAGCTTCTGAATATGGAACAATTGCT
CCATTCCCGAGTCATTGGACAGGATGAAGCTGTTGTCGCTGTAGCAAAAGCAGTGAGACGTGCTCGTGCCGGATTAAAAG
ATCCAAAACGCCCGATTGGCTCCTTTATCTTCTTAGGTCCAACAGGGGTTGGTAAAACTGAGCTTGCAAGAGCACTGGCC
GAGTCTATTTTCGGTGATGAAGAAGCGATGATCCGTATTGACATGTCTGAGTACATGGAGAAGCACTCTACGTCAAGACT
TGTTGGTTCACCTCCAGGCTATGTTGGCTATGACGAAGGTGGTCAATTAACAGAAAAAGTAAGAAGAAAACCATATTCTG
TAGTGCTGTTAGATGAGATCGAAAAAGCGCATCCAGATGTGTTTAATATCTTACTGCAAGTGTTAGAAGACGGACGTCTA
ACTGATTCTAAAGGGCGTACAGTAGACTTTAGAAATACCATTTTGATTATGACATCAAATGTTGGCGCTAGTGAACTGAA
GCGAAATAAATATGTCGGCTTCAACGTTCAAGATGAAAGTCAAAATTACAAAGATATGAAAGGGAAAGTAATGGGTGAGT
TGAAGCGTGCATTTAGACCAGAATTCATCAACCGTATTGATGAAATCATCGTTTTCCACTCACTTGAGAAAAAACATCTA
AAAGAGATCGTTTCCCTCATGTCCGATCAATTGACTAAACGATTAAAAGAGCAGGATCTCTCAATTGAACTAACAGAGGC
AGCGAAAGCGAAGATCGCCGATGAAGGTGTAGACCTTGAGTATGGAGCTCGTCCGTTAAGAAGAGCGATTCAAAAGCATG
TGGAGGATCGTCTTTCTGAGGAATTGCTGAAGGGCAACATTCAAAAGGGTCAACATGTCGTAATAGATGTTGAAAATGGA
GAATTTGTCGTAAAAGCAACTGCTGCTACGAATTAA
ATGATGTTTGGAAGATTCACGGAAAGAGCTCAAAAGGTATTAGCGCTTGCACAAGAAGAAGCTATTCGCTTAGGCCATAA
GAACATCGGAACAGAGCATATTTTACTTGGTCTTGTACGCGAAGGTGAGGGAATTGCCGCAAAAGCATTAGAAGCACTGG
GTCTTGTTTCAGAAAAAATCCAAAAAGAAGTTGAAAGCTTGATTGGGAGAGGACAAGAGGTATCTCAAGCTATTCCTCAT
TATACGCCAAGAGCAAAGAAGGTTACTGAGCTTTCAATGGATGAAGCGAGAAAGCTAGGCCATTCCTATGTGGGGACAGA
ACATATTCTTTTAGGGCTGATTCGTGAAGGCGAGGGTGTAGCTGCCCGCGTATTAAACAATCTCGGAGTGAGCTTAAATA
AAGCGCGTCAACAAGTATTACAGTTGCTTGGTAGCAATGAGACTGGTACCTCTACGGCAGGATCTAATAGCAATGCAAAT
ACGCCAACTTTGGATAGTTTGGCTAGAGATTTAACAGCTATTGCAAAAGAGGACAGTTTAGATCCTGTCATTGGCCGAAG
CAAAGAAATTCAACGTGTGATAGAGGTATTAAGTAGAAGAACGAAGAATAACCCTGTGCTAATCGGTGAACCAGGTGTTG
GTAAAACAGCCATCGCAGAAGGTCTTGCACAGCAAATTATCCACAATGAAGTACCAGAAATATTACGTGATAAACGAGTG
ATGACACTCGATATGGGAACCGTTGTAGCGGGAACGAAGTATCGCGGTGAATTCGAGGATCGTTTAAAAAAAGTCATGGA
TGAAATTCGTCAGGCTGGAAATATTATTCTCTTCATTGATGAACTTCATACATTGATAGGTGCTGGTGGAGCAGAAGGGG
CAATTGATGCTTCTAATATTTTAAAACCATCTTTAGCACGCGGTGAGCTTCAATGTATTGGGGCAACCACGTTAGATGAA
TATCGTAAATATATTGAAAAGGATGCTGCATTAGAACGCCGCTTCCAACCAATTCAAGTCGATCAGCCATCTGTCGATGA
GAGTATTCAAATTTTAAAAGGACTGAGAGATCGTTATGAAGCGCATCATCGTGTATCCATTACGGATGAAGCAATTGAAG
CTGCGGTGAAGTTATCTGATCGTTACATTTCTGATCGTTTCCTTCCTGATAAGGCGATTGATCTGATTGATGAGGCAGGT
TCGAAGGTGCGTTTACGTTCTTTCACCACACCGCCTAATTTAAAGGAACTAGAGCAAAAGCTGGATGAGGTTCGAAAAGA
AAAGGATGCAGCTGTTCAAAGTCAAGAATTTGAAAAAGCAGCTTCATTACGTGATACAGAGCAGCGTCTTCGTGAAAAAG
TAGAAGTGACTAAGAAAACGTGGAAAGAAAAGCAGGGTCAAGAGAATTCAGAGGTATCTGTAGATGATATTGCGATGGTT
GTGTCCAGTTGGACGGGAGTACCTGTTTCAAAAATTGCACAGACCGAAACAGATAAGCTTCTGAATATGGAACAATTGCT
CCATTCCCGAGTCATTGGACAGGATGAAGCTGTTGTCGCTGTAGCAAAAGCAGTGAGACGTGCTCGTGCCGGATTAAAAG
ATCCAAAACGCCCGATTGGCTCCTTTATCTTCTTAGGTCCAACAGGGGTTGGTAAAACTGAGCTTGCAAGAGCACTGGCC
GAGTCTATTTTCGGTGATGAAGAAGCGATGATCCGTATTGACATGTCTGAGTACATGGAGAAGCACTCTACGTCAAGACT
TGTTGGTTCACCTCCAGGCTATGTTGGCTATGACGAAGGTGGTCAATTAACAGAAAAAGTAAGAAGAAAACCATATTCTG
TAGTGCTGTTAGATGAGATCGAAAAAGCGCATCCAGATGTGTTTAATATCTTACTGCAAGTGTTAGAAGACGGACGTCTA
ACTGATTCTAAAGGGCGTACAGTAGACTTTAGAAATACCATTTTGATTATGACATCAAATGTTGGCGCTAGTGAACTGAA
GCGAAATAAATATGTCGGCTTCAACGTTCAAGATGAAAGTCAAAATTACAAAGATATGAAAGGGAAAGTAATGGGTGAGT
TGAAGCGTGCATTTAGACCAGAATTCATCAACCGTATTGATGAAATCATCGTTTTCCACTCACTTGAGAAAAAACATCTA
AAAGAGATCGTTTCCCTCATGTCCGATCAATTGACTAAACGATTAAAAGAGCAGGATCTCTCAATTGAACTAACAGAGGC
AGCGAAAGCGAAGATCGCCGATGAAGGTGTAGACCTTGAGTATGGAGCTCGTCCGTTAAGAAGAGCGATTCAAAAGCATG
TGGAGGATCGTCTTTCTGAGGAATTGCTGAAGGGCAACATTCAAAAGGGTCAACATGTCGTAATAGATGTTGAAAATGGA
GAATTTGTCGTAAAAGCAACTGCTGCTACGAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
95.684 |
100 |
0.957 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.814 |
99.507 |
0.496 |
| clpC | Streptococcus thermophilus LMD-9 |
46.424 |
100 |
0.472 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.182 |
100 |
0.47 |
| clpC | Streptococcus mutans UA159 |
43.675 |
100 |
0.451 |
| clpC | Streptococcus pneumoniae D39 |
49.174 |
89.519 |
0.44 |
| clpC | Streptococcus pneumoniae Rx1 |
49.174 |
89.519 |
0.44 |
| clpC | Streptococcus pneumoniae TIGR4 |
49.036 |
89.519 |
0.439 |
| clpE | Streptococcus mutans UA159 |
53.632 |
79.778 |
0.428 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.927 |
84.957 |
0.424 |
| clpE | Streptococcus pneumoniae Rx1 |
53.042 |
79.038 |
0.419 |
| clpE | Streptococcus pneumoniae D39 |
53.042 |
79.038 |
0.419 |
| clpE | Streptococcus pneumoniae R6 |
53.042 |
79.038 |
0.419 |
| clpE | Streptococcus pneumoniae TIGR4 |
53.155 |
78.175 |
0.416 |