Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   ABVJ71_RS06380 Genome accession   NZ_CP159358
Coordinates   1212049..1213011 (-) Length   320 a.a.
NCBI ID   WP_353856134.1    Uniprot ID   -
Organism   Bacillus sp. Bos-x628     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1207049..1218011
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABVJ71_RS06350 - 1207196..1208188 (-) 993 WP_353856129.1 ABC transporter ATP-binding protein -
  ABVJ71_RS06355 - 1208346..1209149 (-) 804 WP_353856588.1 DUF2268 domain-containing protein -
  ABVJ71_RS06360 fabF 1209226..1210467 (-) 1242 WP_353856130.1 beta-ketoacyl-ACP synthase II -
  ABVJ71_RS06365 - 1210489..1211427 (-) 939 WP_353856131.1 beta-ketoacyl-ACP synthase III -
  ABVJ71_RS06370 - 1211597..1211830 (+) 234 WP_353856132.1 hypothetical protein -
  ABVJ71_RS06375 comZ 1211840..1212037 (-) 198 WP_353856133.1 ComZ family protein Regulator
  ABVJ71_RS06380 med 1212049..1213011 (-) 963 WP_353856134.1 BMP family ABC transporter substrate-binding protein Regulator
  ABVJ71_RS06385 - 1213101..1213673 (-) 573 WP_353856135.1 nad binding enzyme -
  ABVJ71_RS06390 - 1213749..1214489 (-) 741 WP_353856136.1 hypothetical protein -
  ABVJ71_RS06395 - 1214678..1214872 (+) 195 WP_353856137.1 YjzD family protein -
  ABVJ71_RS06400 - 1214915..1216180 (-) 1266 WP_353856138.1 MFS transporter -
  ABVJ71_RS06405 - 1216355..1216534 (-) 180 WP_353856139.1 YjzC family protein -

Sequence

Protein


Download         Length: 320 a.a.        Molecular weight: 35782.85 Da        Isoelectric Point: 6.8506

>NTDB_id=1013375 ABVJ71_RS06380 WP_353856134.1 1212049..1213011(-) (med) [Bacillus sp. Bos-x628]
MKYQRLVMIFSFLLLLSACSQAPLKGHIEKVGLLVPDTINDQVWGTKGYKGLLSIQSTFDVDVYYKEGMVDKEKIVDAIE
DFHKKGVNLIIGHGNEYSDIFNLISEDYPKIQFITVNGGKPRANNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDSHVQVLAEFVENWDDAAKAVKLYEKLKKQGADVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGTLNEKSEYSFDFKEGVIEMGKFSTTIDRSFVKDIKNEITYYKKTGKLPNEK

Nucleotide


Download         Length: 963 bp        

>NTDB_id=1013375 ABVJ71_RS06380 WP_353856134.1 1212049..1213011(-) (med) [Bacillus sp. Bos-x628]
ATGAAGTACCAACGGCTTGTCATGATCTTTTCGTTCCTTCTGCTATTATCTGCCTGCTCGCAGGCCCCTTTAAAAGGACA
TATTGAGAAGGTGGGTTTACTCGTCCCCGATACAATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
GTATCCAATCAACATTTGATGTAGATGTTTATTATAAGGAAGGTATGGTTGACAAGGAGAAAATTGTTGATGCCATTGAG
GATTTCCATAAAAAAGGAGTCAATTTAATTATTGGTCATGGCAATGAGTACAGCGACATTTTTAACTTGATTAGTGAAGA
TTATCCGAAAATACAATTCATTACGGTCAATGGAGGCAAGCCTCGAGCTAACAATGTCACGAATGTTACCTTTAAAGGAG
AGGCAATGGGCTTTTTCGGGGGAATGACAGCAGCACATATGTCAAAAACAAAGAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGACGGATTTATCAAAGGTGCTAAATATCAAGACTCACATGTGCAAGTACTGGCGGAATTTGTCGA
AAACTGGGATGATGCCGCCAAAGCTGTTAAGCTGTATGAAAAGCTGAAAAAACAAGGCGCAGATGTTGTTTATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCTGATAACTTATCAGCGATTGGGTATGTCACCGATCAATCG
AACCTTGGTAGCCATACAGTCTTAACAAGTACGGTACAGCATGTAGATAAAGCATACAGTATCATTGCAAAGAAATTTAA
TGAAGGCACACTAAATGAAAAAAGCGAGTATTCCTTTGATTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGTACAA
CCATTGATCGTTCATTTGTGAAAGACATTAAAAATGAGATTACTTATTACAAGAAAACGGGCAAGCTTCCAAATGAAAAG
TGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(28-318)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.217

97.813

0.628

Multiple sequence alignment