Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ABVJ71_RS06375 Genome accession   NZ_CP159358
Coordinates   1211840..1212037 (-) Length   65 a.a.
NCBI ID   WP_353856133.1    Uniprot ID   -
Organism   Bacillus sp. Bos-x628     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1206840..1217037
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABVJ71_RS06350 - 1207196..1208188 (-) 993 WP_353856129.1 ABC transporter ATP-binding protein -
  ABVJ71_RS06355 - 1208346..1209149 (-) 804 WP_353856588.1 DUF2268 domain-containing protein -
  ABVJ71_RS06360 fabF 1209226..1210467 (-) 1242 WP_353856130.1 beta-ketoacyl-ACP synthase II -
  ABVJ71_RS06365 - 1210489..1211427 (-) 939 WP_353856131.1 beta-ketoacyl-ACP synthase III -
  ABVJ71_RS06370 - 1211597..1211830 (+) 234 WP_353856132.1 hypothetical protein -
  ABVJ71_RS06375 comZ 1211840..1212037 (-) 198 WP_353856133.1 ComZ family protein Regulator
  ABVJ71_RS06380 med 1212049..1213011 (-) 963 WP_353856134.1 BMP family ABC transporter substrate-binding protein Regulator
  ABVJ71_RS06385 - 1213101..1213673 (-) 573 WP_353856135.1 nad binding enzyme -
  ABVJ71_RS06390 - 1213749..1214489 (-) 741 WP_353856136.1 hypothetical protein -
  ABVJ71_RS06395 - 1214678..1214872 (+) 195 WP_353856137.1 YjzD family protein -
  ABVJ71_RS06400 - 1214915..1216180 (-) 1266 WP_353856138.1 MFS transporter -
  ABVJ71_RS06405 - 1216355..1216534 (-) 180 WP_353856139.1 YjzC family protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7447.57 Da        Isoelectric Point: 4.3915

>NTDB_id=1013374 ABVJ71_RS06375 WP_353856133.1 1211840..1212037(-) (comZ) [Bacillus sp. Bos-x628]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLEQEALQPLLTLFTSVMQEAYELGKVDAEAEKATK

Nucleotide


Download         Length: 198 bp        

>NTDB_id=1013374 ABVJ71_RS06375 WP_353856133.1 1211840..1212037(-) (comZ) [Bacillus sp. Bos-x628]
ATGCAGCACGAGAAATCAATGGAGTTTTTGCAAATTGCAATGAAGTATTTTCCGCAAGCAAAAGAAGAATTAGATAAAGC
AGGTATTCAGCTTGAGCAGGAAGCACTTCAGCCGCTTCTGACATTGTTTACATCTGTCATGCAAGAGGCGTATGAGCTTG
GAAAAGTGGATGCAGAAGCAGAAAAAGCCACAAAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70.492

93.846

0.662

Multiple sequence alignment