Detailed information NTG1013261

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ABU610_RS04150
• Genome accession: NZ_CP159333
• Coordinates: 892806..893909 (-)
• Length: 367 a.a.
• NCBI ID: WP_004918085.1
• Uniprot ID: -
• Organism: Riemerella anatipestifer strain TLb2
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 887806..898909

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABU610_RS04125 (ABU610_04125)	comF	889001..889654 (-)	654	WP_004918078.1	ComF family protein	Machinery gene
ABU610_RS04135 (ABU610_04135)	-	889876..890427 (-)	552	WP_004918080.1	hypothetical protein	-
ABU610_RS04140 (ABU610_04140)	-	890482..891132 (-)	651	WP_004918082.1	HD domain-containing protein	-
ABU610_RS04145 (ABU610_04145)	gdhA	891264..892622 (-)	1359	WP_014938006.1	NADP-specific glutamate dehydrogenase	-
ABU610_RS04150 (ABU610_04150)	dprA	892806..893909 (-)	1104	WP_004918085.1	DNA-processing protein DprA	Machinery gene
ABU610_RS04155 (ABU610_04155)	-	893912..894289 (-)	378	WP_004918086.1	group III truncated hemoglobin	-
ABU610_RS04160 (ABU610_04160)	ruvC	894300..894854 (-)	555	WP_004918088.1	crossover junction endodeoxyribonuclease RuvC	-
ABU610_RS04165 (ABU610_04165)	-	894878..896068 (-)	1191	WP_004918090.1	carboxypeptidase-like regulatory domain-containing protein	-
ABU610_RS04170 (ABU610_04170)	-	896098..896571 (-)	474	WP_004918092.1	Lrp/AsnC family transcriptional regulator	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40491.51 Da
• Isoelectric Point: 6.6968

>NTDB_id=1013261 ABU610_RS04150 WP_004918085.1 892806..893909(-) (dprA) [Riemerella anatipestifer strain TLb2]
MVNAEEILYSIALRRSPLVGDVIFASLVSEVGSAKEAWGLSKLELRKISGVGKQIASNIGDKNLLKFAEKEIEFCIKNEI
KIHLRHLNQLPRLLGECYDAPAILFQKGDYEDTANNISIVGTRNATAYGKSFLEDLIVQFKNKNIQVISGLALGTDGIAH
QEALKNNIKTSAVLAHGLHIIYPSKHKILAEEILNNGGALFSEFCSDEKPDREHFLQRNRIVAGLSANTIVVESAYAGGS
ISTASFANQYNREVYALAGRLTDKYSQGCNHLIFQNKAKIISSIKGLLKDLDLDNTSKVLELFPSVEVSLTPVQEPVYDI
IKEVNDISLDDLSEKLNQPISKVFPVLLELELLGLIRANSGRRYSII

Nucleotide

• Length: 1104 bp

>NTDB_id=1013261 ABU610_RS04150 WP_004918085.1 892806..893909(-) (dprA) [Riemerella anatipestifer strain TLb2]
ATGGTAAATGCGGAAGAAATTTTATATTCTATTGCTCTTCGGCGAAGCCCATTGGTGGGAGATGTTATATTTGCAAGTTT
GGTTAGCGAGGTAGGCTCTGCTAAGGAAGCGTGGGGTCTGTCTAAGTTGGAATTACGGAAAATATCAGGCGTAGGTAAGC
AAATTGCCTCAAACATCGGAGATAAAAATCTTTTAAAATTTGCTGAAAAGGAAATAGAGTTCTGCATTAAAAACGAAATA
AAAATCCACTTACGACATCTTAATCAGCTTCCTCGTCTTTTAGGTGAATGTTATGATGCTCCTGCTATTCTTTTTCAAAA
AGGAGATTATGAGGATACCGCTAATAATATTAGTATTGTTGGGACGAGAAATGCCACTGCTTATGGTAAGTCGTTTTTGG
AGGATTTAATTGTTCAGTTTAAAAATAAAAATATTCAAGTCATTAGTGGTTTAGCTTTAGGTACAGACGGAATAGCTCAT
CAAGAGGCTTTAAAAAACAATATAAAAACTTCAGCGGTTTTAGCACACGGTTTACATATCATTTATCCGTCCAAACATAA
AATTCTCGCTGAAGAAATATTAAATAATGGTGGAGCTTTGTTTTCTGAATTCTGCTCTGATGAAAAGCCAGATAGAGAAC
ATTTTTTGCAAAGAAATCGTATTGTGGCAGGGCTTTCGGCTAATACGATTGTGGTAGAGTCTGCTTATGCAGGAGGCTCT
ATTAGCACGGCGAGTTTTGCTAATCAGTATAATAGAGAAGTGTATGCTTTGGCAGGGCGTCTTACAGATAAATATAGCCA
AGGTTGCAATCATCTTATTTTTCAAAATAAAGCTAAAATCATATCTTCTATTAAAGGTTTGCTAAAAGACCTAGATTTGG
ATAATACTTCTAAAGTTTTGGAGCTTTTTCCTTCAGTTGAAGTTTCTTTAACTCCTGTTCAGGAGCCTGTTTATGATATT
ATTAAGGAGGTTAATGATATTTCATTAGATGACTTGTCAGAAAAATTAAATCAACCCATATCTAAAGTGTTTCCTGTTTT
ATTGGAATTAGAATTATTGGGGTTGATAAGGGCAAATTCTGGGAGGAGATATTCTATCATTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

• DprA winged helix domain (DprA_WH) (309-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	100	100	1