Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   ABQM79_RS07875 Genome accession   NZ_CP159198
Coordinates   1672677..1673954 (-) Length   425 a.a.
NCBI ID   WP_045351393.1    Uniprot ID   -
Organism   Lactiplantibacillus plantarum strain GX17 isolate faeces     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1667677..1678954
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABQM79_RS07870 (ABQM79_07870) - 1670928..1672637 (-) 1710 WP_045351392.1 proline--tRNA ligase -
  ABQM79_RS07875 (ABQM79_07875) eeP 1672677..1673954 (-) 1278 WP_045351393.1 RIP metalloprotease RseP Regulator
  ABQM79_RS07880 (ABQM79_07880) - 1673992..1674777 (-) 786 WP_003640734.1 phosphatidate cytidylyltransferase -
  ABQM79_RS07885 (ABQM79_07885) - 1674793..1675572 (-) 780 WP_003640735.1 isoprenyl transferase -
  ABQM79_RS07890 (ABQM79_07890) frr 1675692..1676255 (-) 564 WP_003640736.1 ribosome recycling factor -
  ABQM79_RS07895 (ABQM79_07895) pyrH 1676257..1676979 (-) 723 WP_003640737.1 UMP kinase -
  ABQM79_RS07900 (ABQM79_07900) tsf 1677179..1678057 (-) 879 WP_003644498.1 translation elongation factor Ts -

Sequence


Protein


Download         Length: 425 a.a.        Molecular weight: 45869.39 Da        Isoelectric Point: 9.5616

>NTDB_id=1012822 ABQM79_RS07875 WP_045351393.1 1672677..1673954(-) (eeP) [Lactiplantibacillus plantarum strain GX17 isolate faeces]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQIGPDGIVHSINASKKTTLFNGIPLSVTATDLEKELWIEGYENGDESEVKHYAVDHDATIVESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTHVAATTADSVARTAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQRLTLTINRAGQTKKIAVTPAAKTVSGNRIGQIGVQWVTKTDTSLGAKLAYGFTGSWGITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGVRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=1012822 ABQM79_RS07875 WP_045351393.1 1672677..1673954(-) (eeP) [Lactiplantibacillus plantarum strain GX17 isolate faeces]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGAATCTTGGTCATCGTCCATGAATTTGGGCACTTTTACTTTGC
CAAAAAGGCTGGGATTCTAGTGCGTGAATTTTCTGTCGGGATGGGGCCCAAGGCGGTCGCGTTTCGTCGTAATGCAACAA
CTTATACGTTACGGTTTCTGCCAATCGGTGGTTACGTACGGATGGCCGGTGTGGCCGATGATGAAGATGAAGAACTCAAG
CCCGGAACGCCAGTTAGTTTGCAAATTGGTCCGGATGGGATTGTTCATTCAATCAATGCTAGTAAGAAGACAACGTTGTT
CAATGGAATTCCACTGTCAGTGACGGCGACTGATCTCGAAAAAGAACTCTGGATCGAAGGTTATGAGAACGGGGACGAAA
GTGAAGTTAAACACTACGCCGTCGATCATGACGCTACGATCGTTGAAAGCGATGGTACCGAAGTTCAAATTGCACCGGTC
GACGTCCAATTTCAATCGGCCAAGTTATGGCAACGAATGTTGACGAATTTTGCCGGACCGATGAATAACTTCATTTTGGC
CATCATTACATTTGCAATTCTTGCCTTTATGCAGGGTGGTGTTACGAGTACAACGACCCACGTAGCGGCGACGACAGCAG
ACTCAGTTGCCCGTACGGCCGGTATTCAAAAGGGCGATCAAATCGTGGCGGTTAACGGTAAAAAAATGACGAGTGCCCAA
TCGATTTCGCTGTTGATTCAAGACAGCCCGAAGCAACGGTTGACTTTGACCATCAACCGGGCCGGTCAGACTAAAAAAAT
TGCGGTTACCCCTGCTGCCAAGACGGTCTCTGGTAATCGAATCGGTCAAATCGGGGTCCAATGGGTGACTAAGACCGACA
CGAGCCTGGGGGCCAAGTTAGCATACGGCTTTACTGGTTCGTGGGGAATTACCAAACAGATTTTTCAAGTGCTTGGTCGG
ATGGTCACTCACGGGTTCAGTTTGAATGATTTAGGTGGGCCGGTGGCAATCTTTGCCACGACCTCGCAAGCCGCTAAGTC
CGGGGTGCGCACGGTGATTTATTTGCTCGCCGTGCTGTCGATCAACCTTGGAATTGTTAATTTATTACCGATTCCAGCAC
TTGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGGGGTAAACCACTACGGGTGGAAACGGAAAGTGTCATT
ACCTTGATTGGTTTTGGCCTCCTGATGTTATTAATGATTCTAGTAACTTGGAATGATATTCAGCGATATTTCTTCTAA

Domains


Predicted by InterproScan.

(7-411)

(210-260)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.065

100

0.494

  eeP Streptococcus thermophilus LMD-9

49.065

100

0.494


Multiple sequence alignment