Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ABUH86_RS05635 Genome accession   NZ_CP158669
Coordinates   1104800..1104991 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain XY40-1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1099800..1109991
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABUH86_RS05605 (ABUH86_05605) argF 1100653..1101624 (+) 972 WP_121984159.1 ornithine carbamoyltransferase -
  ABUH86_RS05610 (ABUH86_05610) - 1101700..1101879 (+) 180 WP_003155070.1 YjzC family protein -
  ABUH86_RS05615 (ABUH86_05615) - 1101916..1102101 (-) 186 WP_032874447.1 YjzD family protein -
  ABUH86_RS05620 (ABUH86_05620) - 1102361..1103095 (+) 735 WP_052827254.1 hypothetical protein -
  ABUH86_RS05625 (ABUH86_05625) - 1103178..1103744 (+) 567 WP_007409126.1 hypothetical protein -
  ABUH86_RS05630 (ABUH86_05630) med 1103834..1104787 (+) 954 WP_076423877.1 BMP family ABC transporter substrate-binding protein Regulator
  ABUH86_RS05635 (ABUH86_05635) comZ 1104800..1104991 (+) 192 WP_003155061.1 ComZ family protein Regulator
  ABUH86_RS05640 (ABUH86_05640) - 1105020..1105238 (-) 219 WP_007409123.1 hypothetical protein -
  ABUH86_RS05645 (ABUH86_05645) - 1105405..1106343 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  ABUH86_RS05650 (ABUH86_05650) fabF 1106366..1107604 (+) 1239 WP_003155056.1 beta-ketoacyl-ACP synthase II -
  ABUH86_RS05655 (ABUH86_05655) - 1107688..1108473 (+) 786 WP_012117278.1 DUF2268 domain-containing protein -
  ABUH86_RS05660 (ABUH86_05660) - 1108647..1109633 (+) 987 WP_029325950.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=1011906 ABUH86_RS05635 WP_003155061.1 1104800..1104991(+) (comZ) [Bacillus velezensis strain XY40-1]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1011906 ABUH86_RS05635 WP_003155061.1 1104800..1104991(+) (comZ) [Bacillus velezensis strain XY40-1]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment