Detailed information NTG1011905

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ABUH86_RS05630
• Genome accession: NZ_CP158669
• Coordinates: 1103834..1104787 (+)
• Length: 317 a.a.
• NCBI ID: WP_076423877.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain XY40-1
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1098834..1109787

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABUH86_RS05605 (ABUH86_05605)	argF	1100653..1101624 (+)	972	WP_121984159.1	ornithine carbamoyltransferase	-
ABUH86_RS05610 (ABUH86_05610)	-	1101700..1101879 (+)	180	WP_003155070.1	YjzC family protein	-
ABUH86_RS05615 (ABUH86_05615)	-	1101916..1102101 (-)	186	WP_032874447.1	YjzD family protein	-
ABUH86_RS05620 (ABUH86_05620)	-	1102361..1103095 (+)	735	WP_052827254.1	hypothetical protein	-
ABUH86_RS05625 (ABUH86_05625)	-	1103178..1103744 (+)	567	WP_007409126.1	hypothetical protein	-
ABUH86_RS05630 (ABUH86_05630)	med	1103834..1104787 (+)	954	WP_076423877.1	BMP family ABC transporter substrate-binding protein	Regulator
ABUH86_RS05635 (ABUH86_05635)	comZ	1104800..1104991 (+)	192	WP_003155061.1	ComZ family protein	Regulator
ABUH86_RS05640 (ABUH86_05640)	-	1105020..1105238 (-)	219	WP_007409123.1	hypothetical protein	-
ABUH86_RS05645 (ABUH86_05645)	-	1105405..1106343 (+)	939	WP_007409122.1	beta-ketoacyl-ACP synthase III	-
ABUH86_RS05650 (ABUH86_05650)	fabF	1106366..1107604 (+)	1239	WP_003155056.1	beta-ketoacyl-ACP synthase II	-
ABUH86_RS05655 (ABUH86_05655)	-	1107688..1108473 (+)	786	WP_012117278.1	DUF2268 domain-containing protein	-
ABUH86_RS05660 (ABUH86_05660)	-	1108647..1109633 (+)	987	WP_029325950.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35314.93 Da
• Isoelectric Point: 4.6067

>NTDB_id=1011905 ABUH86_RS05630 WP_076423877.1 1103834..1104787(+) (med) [Bacillus velezensis strain XY40-1]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=1011905 ABUH86_RS05630 WP_076423877.1 1103834..1104787(+) (med) [Bacillus velezensis strain XY40-1]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACTATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAACACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCAAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.549	100	0.785